Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 OR56B2P-201ENST00000317102 954 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 RNU6-984P-201ENST00000363236 109 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 MIR298-201ENST00000401212 88 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AL133270.1-201ENST00000402635 279 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC007394.1-201ENST00000421941 531 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 BRWD1P3-201ENST00000428816 390 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC008072.1-201ENST00000434254 824 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC015795.1-201ENST00000513669 327 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 IGHV3-63-201ENST00000518422 341 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 SULT1C2P2-201ENST00000562517 294 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC010547.7-201ENST00000570323 333 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC015912.2-201ENST00000571053 181 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC027455.1-201ENST00000574104 594 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AL159169.2-201ENST00000610061 1269 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AL049539.1-201ENST00000611964 459 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC026368.1-201ENST00000614934 690 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AL355852.1-201ENST00000454081 1771 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AC074029.4-201ENST00000624796 1859 ntBASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
HLA-DRB4X5D2U9 AL929601.4-201ENST00000613011 1341 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 ZNF137P-201ENST00000456718 1920 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC108467.2-201ENST00000617640 1597 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 RAC1P3-201ENST00000416129 580 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC009302.1-201ENST00000417147 390 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 Z74021.1-201ENST00000423610 407 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 RPL7P33-201ENST00000444159 742 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC108463.1-201ENST00000450258 347 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC104763.1-201ENST00000475274 360 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 RN7SKP34-201ENST00000516142 244 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 OR5M7P-201ENST00000526140 972 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC105129.1-201ENST00000560250 297 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC005520.3-201ENST00000602874 370 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 FAM25E-202ENST00000608562 189 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 U3.53-201ENST00000628922 216 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC125257.1-201ENST00000560400 2930 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 AC135352.1-201ENST00000506173 1418 ntBASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DRB4X5D2U9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
HLA-DRB4X5D2U9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms