Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TMEM30CP-203ENST00000637814 1035 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AC000374.1-201ENST00000434698 1745 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 RNF6P1-201ENST00000444889 1784 ntBASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.42□□□□□ -1.54
BLOC1S4Q9NUP1 AL137100.1-201ENST00000556703 1620 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 MTCO1P18-201ENST00000455518 1419 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 MIR16-2-201ENST00000362117 81 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 U3.30-201ENST00000391308 210 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC019050.1-201ENST00000418508 492 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 RPL12P34-201ENST00000424532 479 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 OR2AH1P-201ENST00000425717 928 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC093422.3-201ENST00000428506 305 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC239809.1-201ENST00000450470 217 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 RPL7P55-201ENST00000450522 746 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 UBTFL9-201ENST00000534504 1148 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 ADAD1P2-201ENST00000588476 646 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC013244.1-201ENST00000604279 193 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC100847.1-201ENST00000611316 481 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 CR381572.2-201ENST00000624852 397 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC008432.1-201ENST00000615912 1320 ntBASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
BLOC1S4Q9NUP1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC005522.1-201ENST00000395416 346 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AL589647.1-201ENST00000402485 466 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 ARL4AP5-201ENST00000404372 599 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 MTND2P8-201ENST00000450555 1025 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AL935212.3-201ENST00000450729 284 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 SETP6-201ENST00000479329 568 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 MTCO2P9-201ENST00000503214 694 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 HMGB3P16-201ENST00000508037 287 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC112518.2-201ENST00000508565 425 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 RNA5SP303-201ENST00000516192 130 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC044860.2-201ENST00000561005 179 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC104229.1-201ENST00000561364 255 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 SNORA74C-1-201ENST00000580726 201 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AC090510.2-201ENST00000617465 629 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AL163051.2-201ENST00000618976 735 ntBASIC5.4□□□□□ -1.54
BLOC1S4Q9NUP1 AL034370.1-201ENST00000397254 1590 ntBASIC5.4□□□□□ -1.55
BLOC1S4Q9NUP1 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.4□□□□□ -1.55
BLOC1S4Q9NUP1 DDX18P5-201ENST00000534547 1306 ntBASIC5.4□□□□□ -1.55
BLOC1S4Q9NUP1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.55
BLOC1S4Q9NUP1 AC114546.3-201ENST00000623582 1734 ntBASIC5.4□□□□□ -1.55
BLOC1S4Q9NUP1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
BLOC1S4Q9NUP1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
BLOC1S4Q9NUP1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
BLOC1S4Q9NUP1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 ASNSP1-201ENST00000518311 1939 ntBASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
BLOC1S4Q9NUP1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms