Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRRK2Q5S007 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LRRK2Q5S007 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 RPS27AP1-201ENST00000475545 471 ntBASIC3.84□□□□□ -1.79
LRRK2Q5S007 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 AC098799.1-201ENST00000504752 800 ntBASIC3.84□□□□□ -1.79
LRRK2Q5S007 PGBD4P4-201ENST00000509673 613 ntBASIC3.84□□□□□ -1.79
LRRK2Q5S007 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.84□□□□□ -1.79
LRRK2Q5S007 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LRRK2Q5S007 AL158827.1-201ENST00000416300 391 ntBASIC3.84□□□□□ -1.8
LRRK2Q5S007 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC3.84□□□□□ -1.8
LRRK2Q5S007 AC114495.1-201ENST00000441274 436 ntBASIC3.84□□□□□ -1.8
LRRK2Q5S007 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
LRRK2Q5S007 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.84□□□□□ -1.8
LRRK2Q5S007 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
LRRK2Q5S007 MIR6133-201ENST00000617057 108 ntBASIC3.84□□□□□ -1.8
LRRK2Q5S007 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.84□□□□□ -1.8
LRRK2Q5S007 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
LRRK2Q5S007 AC016588.2-201ENST00000632484 3021 ntBASIC3.84□□□□□ -1.8
LRRK2Q5S007 AC233263.6-201ENST00000631132 1963 ntBASIC3.84□□□□□ -1.8
LRRK2Q5S007 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
LRRK2Q5S007 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 PPIAP13-201ENST00000434706 478 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 CREM-220ENST00000463314 964 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AC090142.1-201ENST00000465776 462 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 uc_338.13-201ENST00000618243 179 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AL122016.1-201ENST00000403365 367 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 RN7SKP156-201ENST00000410308 342 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 CTSL3P-202ENST00000412179 788 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AC005412.1-201ENST00000580812 1049 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AC025175.1-201ENST00000606482 759 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AC012314.7-201ENST00000619693 93 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AP001002.2-201ENST00000625137 386 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 MIR3651-201ENST00000630427 90 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 AP001157.1-201ENST00000550837 2339 ntBASIC3.83□□□□□ -1.8
LRRK2Q5S007 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LRRK2Q5S007 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LRRK2Q5S007 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
LRRK2Q5S007 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRK2Q5S007 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRK2Q5S007 AL360270.2-201ENST00000562952 5985 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRK2Q5S007 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LRRK2Q5S007 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.82□□□□□ -1.8
LRRK2Q5S007 RPL7AP49-201ENST00000429522 581 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 AL591438.1-201ENST00000433508 581 ntBASIC3.82□□□□□ -1.8
LRRK2Q5S007 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms