Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AK3P4-201ENST00000504283 583 ntBASIC4.99□□□□□ -1.61
HPS4Q9NQG7 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 AL049839.1-201ENST00000556151 657 ntBASIC4.99□□□□□ -1.61
HPS4Q9NQG7 MIR4284-201ENST00000578924 81 ntBASIC4.99□□□□□ -1.61
HPS4Q9NQG7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 MIR4715-201ENST00000584117 79 ntBASIC4.99□□□□□ -1.61
HPS4Q9NQG7 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 AC022387.2-201ENST00000604050 448 ntBASIC4.99□□□□□ -1.61
HPS4Q9NQG7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 ASNSP1-201ENST00000518311 1939 ntBASIC4.99□□□□□ -1.61
HPS4Q9NQG7 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.99□□□□□ -1.61
HPS4Q9NQG7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AL121950.1-201ENST00000624993 2077 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 KARSP3-201ENST00000571212 1504 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 RNA5SP105-201ENST00000391123 113 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 MIR1271-201ENST00000408537 86 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AL645608.4-201ENST00000423619 154 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AL353597.2-202ENST00000434901 373 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AC016831.4-201ENST00000438302 307 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 RSL24D1P2-201ENST00000445584 366 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AL035551.1-201ENST00000446931 348 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 RNU2-30P-201ENST00000516209 141 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 BUD31P1-201ENST00000521828 359 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AC133555.2-201ENST00000550213 292 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 BX005214.3-202ENST00000619809 325 ntBASIC4.98□□□□□ -1.61
HPS4Q9NQG7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
HPS4Q9NQG7 MAPK10-304ENST00000641341 3984 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 AC008758.3-201ENST00000507003 1829 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 FAM3C2-201ENST00000312214 681 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 SNORA73.1-201ENST00000363107 205 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 RPS20P25-201ENST00000412447 352 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 OR2AH1P-201ENST00000425717 928 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 RPL23AP1-201ENST00000428990 471 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 RPS23P7-201ENST00000466210 444 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 AC104971.1-201ENST00000495117 578 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 SNORA48.9-201ENST00000516419 162 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 AC026688.1-201ENST00000520639 1168 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 AL110118.1-201ENST00000553543 400 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 RN7SL802P-201ENST00000577858 299 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 BX005019.1-201ENST00000561881 1810 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 AC087190.4-201ENST00000574616 8334 ntBASIC4.97□□□□□ -1.61
HPS4Q9NQG7 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HPS4Q9NQG7 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.96□□□□□ -1.61
HPS4Q9NQG7 CASC19-204ENST00000641001 2055 ntBASIC4.96□□□□□ -1.61
HPS4Q9NQG7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.61
HPS4Q9NQG7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HPS4Q9NQG7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms