Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC073365.1-203ENST00000641055 1992 ntBASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.27□□□□□ -1.57
SSBP3Q9BWW4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 SAMMSON-210ENST00000641260 1308 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 DOCK11P1-201ENST00000553480 5932 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 IFIT1P1-201ENST00000400497 1449 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AL451142.1-201ENST00000375867 775 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 Y_RNA.460-201ENST00000384255 102 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AP000357.1-201ENST00000409926 1165 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 RN7SKP144-201ENST00000411108 279 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 RNU6-575P-201ENST00000411326 105 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC094019.1-201ENST00000434678 472 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AL033528.1-201ENST00000453780 140 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC104849.1-201ENST00000462623 405 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 RPL12P31-201ENST00000478433 450 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AP000797.1-201ENST00000478870 387 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 LARP1BP2-201ENST00000486594 519 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 SETP14-201ENST00000497538 873 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 SNX18P24-201ENST00000505249 671 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 OR4D12P-201ENST00000509361 911 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC010343.2-201ENST00000510162 224 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 HSD3BP3-201ENST00000514706 994 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 RNA5SP206-201ENST00000516703 121 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 SNORA81.2-201ENST00000516868 170 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 IGHV1-14-201ENST00000523391 241 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 PSMB7P1-201ENST00000556349 514 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AL845552.1-201ENST00000556820 323 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 OR1E3-201ENST00000575608 948 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC005332.4-201ENST00000592752 579 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AL390838.2-201ENST00000602394 274 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC020910.2-201ENST00000603635 610 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 BNIP3P11-201ENST00000603878 563 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC233280.2-201ENST00000603917 1070 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC005084.1-201ENST00000605160 304 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC093838.1-201ENST00000613014 469 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 MIR7159-201ENST00000620587 66 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC090574.1-201ENST00000623186 233 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC007342.8-201ENST00000623278 678 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AC063952.1-203ENST00000634410 658 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 LYARP1-201ENST00000436977 1501 ntBASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSBP3Q9BWW4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.25□□□□□ -1.57
SSBP3Q9BWW4 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSBP3Q9BWW4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
SSBP3Q9BWW4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSBP3Q9BWW4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSBP3Q9BWW4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSBP3Q9BWW4 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms