Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
CDK5RAP3Q96JB5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 MAPK10-338ENST00000641647 3362 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC005294.1-201ENST00000355509 281 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 RNU4-44P-201ENST00000363050 141 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 RN7SKP162-201ENST00000363605 345 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 RNU6-185P-201ENST00000384421 107 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 RPL23AP59-201ENST00000399415 461 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AL136231.1-201ENST00000429407 730 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 RPS29P10-201ENST00000439197 166 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 PTGES3P1-201ENST00000439531 483 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AL589765.3-201ENST00000446084 462 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 NOP56P2-201ENST00000447491 769 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 OR52E3P-201ENST00000452083 936 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 MTCO2P6-201ENST00000463134 685 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 RN7SL814P-201ENST00000487715 300 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC023050.1-201ENST00000498198 304 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 GTF2F2P1-201ENST00000511083 675 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 ATP5LP3-201ENST00000514223 304 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC006427.1-201ENST00000514359 712 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 RNA5SP373-201ENST00000517271 95 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 HMGB1P1-201ENST00000522557 636 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 OR7E128P-201ENST00000532736 1024 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC006518.2-201ENST00000542513 940 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC024060.1-201ENST00000607052 494 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AL355493.4-201ENST00000618530 292 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC011330.2-201ENST00000621680 635 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AP001005.3-201ENST00000622049 129 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AC138965.3-201ENST00000623875 498 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 CIR1P2-201ENST00000514821 1342 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 BTBD10P1-201ENST00000549824 1352 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 OR9K1P-202ENST00000641111 3217 ntBASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDK5RAP3Q96JB5 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 Y_RNA.578-201ENST00000390903 88 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 AP000357.1-201ENST00000409926 1165 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 AC108075.1-201ENST00000424692 529 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 AL353093.1-201ENST00000441292 436 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 MRPL35P2-201ENST00000448009 511 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 ZNF886P-201ENST00000450781 723 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 RNU7-27P-201ENST00000459281 62 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 RPL7P6-201ENST00000480903 738 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 RPS4XP1-201ENST00000482189 787 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 AL049874.2-201ENST00000492636 288 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 AC093890.1-201ENST00000502554 540 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 MTCYBP35-201ENST00000503630 1137 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 BOLA3P3-201ENST00000505182 232 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 RPS4XP20-201ENST00000505751 772 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 DUXAP5-201ENST00000529668 529 ntBASIC5.88□□□□□ -1.47
CDK5RAP3Q96JB5 AC025260.1-201ENST00000548858 430 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms