Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 EOGT-210ENST00000615922 1931 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ATP5F1P3-201ENST00000397213 657 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 U3.35-201ENST00000408405 208 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 VN1R37P-201ENST00000419096 748 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC008481.1-201ENST00000463278 396 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RN7SL443P-201ENST00000464331 290 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ZNF137P-201ENST00000456718 1920 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RN7SKP153-201ENST00000365026 316 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AMZ2P2-201ENST00000406819 1057 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 HYKK-202ENST00000408962 847 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 NPM1P34-201ENST00000428821 893 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 MRPL50P1-201ENST00000431951 384 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 GTF3AP5-201ENST00000442645 697 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC104651.2-201ENST00000447549 528 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 MTND4LP2-201ENST00000502312 285 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 OR5D2P-201ENST00000524390 911 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 HMGN2P47-201ENST00000559378 272 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC040958.1-201ENST00000561102 201 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 HYKK-203ENST00000563233 734 ntTSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC116553.2-201ENST00000564203 463 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC022884.2-201ENST00000578535 580 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC007546.1-201ENST00000619452 559 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AL022401.1-201ENST00000619498 108 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 OR2L1P-202ENST00000641567 1023 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 PRSS3P4-201ENST00000453323 162 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 Z95152.1-201ENST00000453556 656 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RNU4ATAC18P-201ENST00000516179 126 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC010424.2-201ENST00000607594 443 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LDHA-225ENST00000625635 141 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC090220.1-201ENST00000593078 1699 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ARHGAP42P1-201ENST00000507474 1976 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 OSBPL9P1-201ENST00000604744 1469 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 RNU1-20P-201ENST00000363314 162 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 AGGF1P9-201ENST00000561884 913 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 MIR7151-201ENST00000617477 60 ntBASIC1.39□□□□□ -2.19
SYNE1Q8NF91 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC1.39□□□□□ -2.19
SYNE1Q8NF91 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms