Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 RNVU1-6-201ENST00000364688 164 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 MIR192-201ENST00000384915 110 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC240504.1-201ENST00000395709 845 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 TRIM60P17-201ENST00000415181 719 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AL590139.1-201ENST00000416267 400 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AF186996.5-201ENST00000418098 904 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC245028.1-201ENST00000423259 256 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 HMGB1P32-201ENST00000425971 565 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 BX323845.1-201ENST00000432417 179 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 TCEA1P1-201ENST00000449716 880 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 OR52J1P-201ENST00000450596 932 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 RPS29P33-201ENST00000456717 146 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC005229.2-201ENST00000456995 399 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 PSMC1P13-201ENST00000458195 985 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC021205.1-201ENST00000468797 348 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC008897.1-201ENST00000494006 347 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 HMGB3P13-201ENST00000511263 607 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC105031.1-201ENST00000518550 476 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 UBE2FP2-201ENST00000566646 462 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 MIR4716-201ENST00000579628 84 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC009318.3-201ENST00000616916 503 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 MIR6839-201ENST00000620425 113 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 SDAD1P1-202ENST00000524156 2051 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SCXQ7RTU7 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCXQ7RTU7 AC099654.2-201ENST00000433031 1980 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCXQ7RTU7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SCXQ7RTU7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SCXQ7RTU7 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCXQ7RTU7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SCXQ7RTU7 SNORA2.3-201ENST00000383920 135 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 AL390316.1-201ENST00000406279 553 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 SNORA77-201ENST00000408716 125 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 FAR2P2-201ENST00000413041 594 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 EIF4A1P1-201ENST00000420241 934 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 FAR2P4-202ENST00000425399 584 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 RWDD4P2-201ENST00000426392 563 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 AC046176.1-201ENST00000435260 1170 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 RPL7P11-201ENST00000437586 658 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 RPL7P31-201ENST00000450192 724 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 AC009220.1-201ENST00000451614 275 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 AC011037.1-201ENST00000483964 558 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 RWDD4P1-201ENST00000488019 565 ntBASIC3.18□□□□□ -1.9
SCXQ7RTU7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.18□□□□□ -1.9
SCXQ7RTU7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms