Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC108078.3-201ENST00000502633 489 ntBASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC136618.2-201ENST00000575091 400 ntBASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC024267.2-201ENST00000582737 417 ntBASIC7□□□□□ -1.29
FOXR1Q6PIV2 BNIP3P4-201ENST00000604946 565 ntBASIC7□□□□□ -1.29
FOXR1Q6PIV2 AL445647.2-201ENST00000615170 130 ntBASIC7□□□□□ -1.29
FOXR1Q6PIV2 OR1N1-202ENST00000619659 939 ntBASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC009268.2-201ENST00000621925 457 ntBASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC006840.1-201ENST00000623069 542 ntBASIC7□□□□□ -1.29
FOXR1Q6PIV2 AC120057.5-201ENST00000623840 154 ntBASIC7□□□□□ -1.29
FOXR1Q6PIV2 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
FOXR1Q6PIV2 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7□□□□□ -1.29
FOXR1Q6PIV2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
FOXR1Q6PIV2 RLIMP2-201ENST00000427891 1563 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 MTND5P33-201ENST00000571250 1450 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 STAG3L4-201ENST00000352103 530 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 SNORA70.8-201ENST00000384231 136 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 EI24P3-201ENST00000399046 1062 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RPL5P18-201ENST00000406671 891 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AL139805.1-201ENST00000407837 289 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RN7SKP148-201ENST00000410179 275 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RNA5SP115-201ENST00000411160 107 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RNU2-18P-201ENST00000411224 162 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC068138.1-201ENST00000412635 217 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 EIF1P3-201ENST00000423841 334 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 ISCA1P6-201ENST00000427740 390 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 LINC00328-2P-201ENST00000436585 219 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AL731892.1-201ENST00000437364 1192 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RPEP4-201ENST00000437636 602 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RPL7P54-201ENST00000438336 674 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 ARL2BPP10-201ENST00000446487 531 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 PMS2P11-201ENST00000451831 574 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 MTND5P22-201ENST00000458380 195 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 Y_RNA.631-201ENST00000459607 101 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RN7SL655P-201ENST00000486087 298 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AF213884.1-201ENST00000488102 463 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RPL7P38-201ENST00000488396 739 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 SNRPCP11-201ENST00000492453 205 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 RPSAP66-201ENST00000592196 606 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC068722.2-201ENST00000618734 544 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 AC100810.6-201ENST00000638068 285 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 OR7E161P-202ENST00000641994 1033 ntBASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
FOXR1Q6PIV2 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms