Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CXCL12P48061 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.51□□□□□ -1.69
CXCL12P48061 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CXCL12P48061 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CXCL12P48061 MAPK10-320ENST00000641462 6696 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
CXCL12P48061 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CXCL12P48061 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL12P48061 AC004817.4-201ENST00000602396 3625 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL12P48061 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL12P48061 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL12P48061 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL12P48061 RAB9AP4-201ENST00000415230 609 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL12P48061 COX6CP15-201ENST00000426313 211 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 NPM1P26-201ENST00000426339 738 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 RPL7P2-201ENST00000427639 268 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 AL117339.2-201ENST00000430475 180 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 RPL35AP21-201ENST00000437667 333 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CXCL12P48061 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL12P48061 AL935212.3-201ENST00000450729 284 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL12P48061 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CXCL12P48061 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL12P48061 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL12P48061 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL12P48061 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CXCL12P48061 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL12P48061 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL12P48061 MIR4444-1-201ENST00000581696 74 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 MIR4444-2-201ENST00000584390 74 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL12P48061 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 AL122125.1-201ENST00000616999 600 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.5□□□□□ -1.69
CXCL12P48061 AC140479.6-201ENST00000633535 357 ntBASIC4.5□□□□□ -1.69
CXCL12P48061 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL12P48061 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CXCL12P48061 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL12P48061 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL12P48061 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.5□□□□□ -1.69
CXCL12P48061 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.5□□□□□ -1.69
CXCL12P48061 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CXCL12P48061 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
CXCL12P48061 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CXCL12P48061 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL12P48061 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL12P48061 AC092451.3-201ENST00000625067 1343 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL12P48061 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL12P48061 AL034370.1-201ENST00000397254 1590 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 AL445487.1-201ENST00000415694 1580 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL12P48061 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CXCL12P48061 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.49□□□□□ -1.69
CXCL12P48061 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
CXCL12P48061 RPS27AP11-201ENST00000402798 447 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 U3.35-201ENST00000408405 208 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 AC002524.1-201ENST00000411687 547 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.49□□□□□ -1.69
CXCL12P48061 AC006326.1-201ENST00000445465 787 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 AC012671.1-201ENST00000451912 203 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.49□□□□□ -1.69
CXCL12P48061 AC079804.1-201ENST00000461922 436 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
CXCL12P48061 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.49□□□□□ -1.69
CXCL12P48061 RNU1-45P-201ENST00000517191 141 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.49□□□□□ -1.69
CXCL12P48061 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL12P48061 TRAV8-5-201ENST00000537369 341 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL12P48061 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.49□□□□□ -1.69
CXCL12P48061 TVP23BP1-201ENST00000557500 617 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 AC087477.6-201ENST00000559595 843 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.49□□□□□ -1.69
CXCL12P48061 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.49□□□□□ -1.69
CXCL12P48061 AC010809.3-201ENST00000621310 641 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL12P48061 CPHL1P-201ENST00000461341 3407 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL12P48061 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL12P48061 AL158163.1-201ENST00000603915 1649 ntBASIC4.49□□□□□ -1.69
CXCL12P48061 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CXCL12P48061 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 AC027228.2-201ENST00000567141 2154 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CXCL12P48061 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CXCL12P48061 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CXCL12P48061 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CXCL12P48061 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 RNA5SP513-201ENST00000364648 118 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CXCL12P48061 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
CXCL12P48061 MIR3065-201ENST00000390137 79 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 AC009237.10-201ENST00000414112 510 ntBASIC4.48□□□□□ -1.69
CXCL12P48061 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms