Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXD13P35453 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXD13P35453 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXD13P35453 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXD13P35453 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HOXD13P35453 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXD13P35453 PHKBP1-201ENST00000450951 1951 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXD13P35453 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXD13P35453 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD13P35453 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD13P35453 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXD13P35453 AC025574.1-201ENST00000554784 1653 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD13P35453 METTL21EP-201ENST00000298105 713 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 SNORA58B-201ENST00000364259 136 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXD13P35453 U3.35-201ENST00000408405 208 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 LINC01347-201ENST00000417964 355 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 OR6C64P-201ENST00000419708 825 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 LINC00993-201ENST00000420453 540 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 E2F6P2-201ENST00000420708 748 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXD13P35453 AC007394.1-201ENST00000421941 531 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 RPL7P57-201ENST00000423238 740 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 RPS17P8-201ENST00000434525 335 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AL031663.1-201ENST00000437445 219 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 ELOCP10-201ENST00000440624 327 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 RPL7P61-201ENST00000451721 751 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AC234781.3-201ENST00000452540 973 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 TPT1P1-201ENST00000458495 518 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXD13P35453 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 RNA5SP303-201ENST00000516192 130 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXD13P35453 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 MIR5699-201ENST00000578903 90 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AC022726.1-201ENST00000587475 207 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXD13P35453 ELOCP34-201ENST00000604436 327 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXD13P35453 AC116447.1-201ENST00000613153 453 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD13P35453 AC015804.1-201ENST00000622935 435 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AC106730.3-201ENST00000624568 641 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 AC080188.3-201ENST00000624842 748 ntBASIC5.29□□□□□ -1.56
HOXD13P35453 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXD13P35453 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXD13P35453 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HOXD13P35453 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXD13P35453 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXD13P35453 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXD13P35453 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HOXD13P35453 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD13P35453 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD13P35453 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD13P35453 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD13P35453 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXD13P35453 DDX18P5-201ENST00000534547 1306 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 IGKV7-3-201ENST00000357453 298 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 MIR16-2-201ENST00000362117 81 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD13P35453 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD13P35453 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXD13P35453 SETP15-201ENST00000412724 337 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 GSTM3P2-201ENST00000412746 530 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 AC013404.1-201ENST00000413068 249 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 AL590762.4-201ENST00000425885 253 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 AC007559.1-201ENST00000428736 355 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 PRPF38AP2-201ENST00000438179 851 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD13P35453 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD13P35453 AL591623.2-201ENST00000449978 222 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD13P35453 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXD13P35453 RPL32P9-201ENST00000487963 407 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 SCARNA22-201ENST00000503991 125 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD13P35453 BUD31P1-201ENST00000521828 359 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXD13P35453 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXD13P35453 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXD13P35453 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXD13P35453 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXD13P35453 POLR2KP1-201ENST00000553226 168 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXD13P35453 MIR4646-201ENST00000580775 63 ntBASIC5.28□□□□□ -1.56
HOXD13P35453 MIR4472-2-201ENST00000582069 67 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms