Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 NDUFB4P12-201ENST00000513465 390 ntBASIC7.29□□□□□ -1.24
RXRBP28702 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC7.29□□□□□ -1.24
RXRBP28702 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC7.29□□□□□ -1.24
RXRBP28702 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.29□□□□□ -1.24
RXRBP28702 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RXRBP28702 AC011453.2-201ENST00000603737 729 ntBASIC7.29□□□□□ -1.24
RXRBP28702 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.29□□□□□ -1.24
RXRBP28702 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.29□□□□□ -1.24
RXRBP28702 OR51C1P-201ENST00000608504 942 ntBASIC7.29□□□□□ -1.24
RXRBP28702 AC128687.2-201ENST00000609657 566 ntBASIC7.29□□□□□ -1.24
RXRBP28702 AF246928.1-201ENST00000623768 87 ntBASIC7.29□□□□□ -1.24
RXRBP28702 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC7.29□□□□□ -1.24
RXRBP28702 OR52H1-202ENST00000641796 1061 ntBASIC7.29□□□□□ -1.24
RXRBP28702 AL359195.2-201ENST00000623657 4412 ntBASIC7.29□□□□□ -1.24
RXRBP28702 AC006213.6-201ENST00000623722 4179 ntBASIC7.29□□□□□ -1.24
RXRBP28702 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.29□□□□□ -1.24
RXRBP28702 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RXRBP28702 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
RXRBP28702 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.29□□□□□ -1.24
RXRBP28702 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.29□□□□□ -1.24
RXRBP28702 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.29□□□□□ -1.24
RXRBP28702 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
RXRBP28702 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.29□□□□□ -1.24
RXRBP28702 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
RXRBP28702 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
RXRBP28702 SDAD1P1-202ENST00000524156 2051 ntBASIC7.29□□□□□ -1.24
RXRBP28702 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC7.29□□□□□ -1.24
RXRBP28702 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.29□□□□□ -1.24
RXRBP28702 AC104118.1-201ENST00000607625 1589 ntBASIC7.29□□□□□ -1.24
RXRBP28702 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
RXRBP28702 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.28□□□□□ -1.24
RXRBP28702 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.28□□□□□ -1.24
RXRBP28702 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 AL669831.5-218ENST00000591702 1873 ntBASIC7.28□□□□□ -1.24
RXRBP28702 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.28□□□□□ -1.24
RXRBP28702 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.28□□□□□ -1.24
RXRBP28702 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RXRBP28702 FAM3C2-201ENST00000312214 681 ntBASIC7.28□□□□□ -1.24
RXRBP28702 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RXRBP28702 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
RXRBP28702 FAM32BP-201ENST00000344033 333 ntBASIC7.28□□□□□ -1.24
RXRBP28702 RNA5-8SP7-201ENST00000363443 155 ntBASIC7.28□□□□□ -1.24
RXRBP28702 RNU6-1005P-201ENST00000384519 107 ntBASIC7.28□□□□□ -1.24
RXRBP28702 RNA5SP332-201ENST00000391063 115 ntBASIC7.28□□□□□ -1.24
RXRBP28702 SNORA57.1-201ENST00000391227 145 ntBASIC7.28□□□□□ -1.24
RXRBP28702 SNORA11.2-201ENST00000408318 127 ntBASIC7.28□□□□□ -1.24
RXRBP28702 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 CHEK2P3-201ENST00000416118 248 ntBASIC7.28□□□□□ -1.24
RXRBP28702 MTCO2P34-201ENST00000421994 607 ntBASIC7.28□□□□□ -1.24
RXRBP28702 AL389915.1-201ENST00000422463 466 ntBASIC7.28□□□□□ -1.24
RXRBP28702 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC7.28□□□□□ -1.24
RXRBP28702 IPMKP1-201ENST00000425988 855 ntBASIC7.28□□□□□ -1.24
RXRBP28702 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.28□□□□□ -1.24
RXRBP28702 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.28□□□□□ -1.24
RXRBP28702 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.28□□□□□ -1.24
RXRBP28702 MRPL42P4-201ENST00000453267 443 ntBASIC7.28□□□□□ -1.24
RXRBP28702 PPIAP21-201ENST00000464473 501 ntBASIC7.28□□□□□ -1.24
RXRBP28702 RPS4XP6-201ENST00000477670 797 ntBASIC7.28□□□□□ -1.24
RXRBP28702 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC7.28□□□□□ -1.24
RXRBP28702 HMGB1P3-201ENST00000502802 616 ntBASIC7.28□□□□□ -1.24
RXRBP28702 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC7.28□□□□□ -1.24
RXRBP28702 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.28□□□□□ -1.24
RXRBP28702 AL121766.1-201ENST00000547436 487 ntBASIC7.28□□□□□ -1.24
RXRBP28702 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.28□□□□□ -1.24
RXRBP28702 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.28□□□□□ -1.24
RXRBP28702 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.28□□□□□ -1.24
RXRBP28702 AC015818.6-201ENST00000584274 634 ntBASIC7.28□□□□□ -1.24
RXRBP28702 AP001269.3-201ENST00000588718 329 ntBASIC7.28□□□□□ -1.24
RXRBP28702 VN1R82P-201ENST00000601481 356 ntBASIC7.28□□□□□ -1.24
RXRBP28702 MTCO3P22-201ENST00000603219 784 ntBASIC7.28□□□□□ -1.24
RXRBP28702 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC7.28□□□□□ -1.24
RXRBP28702 AC012254.5-201ENST00000623573 478 ntBASIC7.28□□□□□ -1.24
RXRBP28702 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.28□□□□□ -1.24
RXRBP28702 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 AP004607.3-201ENST00000530354 3915 ntBASIC7.28□□□□□ -1.24
RXRBP28702 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.28□□□□□ -1.24
RXRBP28702 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
RXRBP28702 LCOR-201ENST00000286067 4542 ntBASIC7.28□□□□□ -1.24
RXRBP28702 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
RXRBP28702 AC092692.1-201ENST00000623625 2595 ntBASIC7.27□□□□□ -1.25
RXRBP28702 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
RXRBP28702 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RXRBP28702 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.27□□□□□ -1.25
RXRBP28702 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
RXRBP28702 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.27□□□□□ -1.25
RXRBP28702 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms