Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 PEX12P1-201ENST00000400284 1048 ntBASIC5.36□□□□□ -1.55
MMP3P08254 GSTA12P-201ENST00000402398 508 ntBASIC5.36□□□□□ -1.55
MMP3P08254 AL024507.1-201ENST00000412741 274 ntBASIC5.36□□□□□ -1.55
MMP3P08254 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.36□□□□□ -1.55
MMP3P08254 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.36□□□□□ -1.55
MMP3P08254 AC006065.1-201ENST00000422539 802 ntBASIC5.36□□□□□ -1.55
MMP3P08254 RPS17P8-201ENST00000434525 335 ntBASIC5.36□□□□□ -1.55
MMP3P08254 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC5.36□□□□□ -1.55
MMP3P08254 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.36□□□□□ -1.55
MMP3P08254 ARL2BPP10-201ENST00000446487 531 ntBASIC5.36□□□□□ -1.55
MMP3P08254 RPS23P7-201ENST00000466210 444 ntBASIC5.36□□□□□ -1.55
MMP3P08254 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.36□□□□□ -1.55
MMP3P08254 RN7SL558P-201ENST00000497468 299 ntBASIC5.36□□□□□ -1.55
MMP3P08254 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 IGBP1P5-201ENST00000507524 1000 ntBASIC5.36□□□□□ -1.55
MMP3P08254 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.36□□□□□ -1.55
MMP3P08254 RNU1-6P-201ENST00000516290 144 ntBASIC5.36□□□□□ -1.55
MMP3P08254 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.36□□□□□ -1.55
MMP3P08254 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.36□□□□□ -1.55
MMP3P08254 AC073091.2-201ENST00000603205 907 ntBASIC5.36□□□□□ -1.55
MMP3P08254 AC018754.1-201ENST00000607486 925 ntBASIC5.36□□□□□ -1.55
MMP3P08254 AL121652.1-201ENST00000608851 448 ntBASIC5.36□□□□□ -1.55
MMP3P08254 AC091046.2-201ENST00000620775 665 ntBASIC5.36□□□□□ -1.55
MMP3P08254 AC016717.3-201ENST00000624730 554 ntBASIC5.36□□□□□ -1.55
MMP3P08254 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.36□□□□□ -1.55
MMP3P08254 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
MMP3P08254 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
MMP3P08254 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 AC003985.2-201ENST00000562268 1669 ntBASIC5.36□□□□□ -1.55
MMP3P08254 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.36□□□□□ -1.55
MMP3P08254 AC006484.1-201ENST00000435086 1884 ntBASIC5.36□□□□□ -1.55
MMP3P08254 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
MMP3P08254 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.36□□□□□ -1.55
MMP3P08254 AC063976.2-201ENST00000425667 3556 ntBASIC5.36□□□□□ -1.55
MMP3P08254 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MMP3P08254 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MMP3P08254 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MMP3P08254 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
MMP3P08254 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
MMP3P08254 NAMPTP1-201ENST00000440465 2514 ntBASIC5.35□□□□□ -1.55
MMP3P08254 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
MMP3P08254 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.35□□□□□ -1.55
MMP3P08254 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MMP3P08254 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
MMP3P08254 AL645568.2-201ENST00000432815 1337 ntBASIC5.35□□□□□ -1.55
MMP3P08254 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
MMP3P08254 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
MMP3P08254 RNU11-201ENST00000387069 134 ntBASIC5.35□□□□□ -1.55
MMP3P08254 RNA5SP397-201ENST00000391323 118 ntBASIC5.35□□□□□ -1.55
MMP3P08254 AL445213.1-201ENST00000412589 747 ntBASIC5.35□□□□□ -1.55
MMP3P08254 PCNPP4-201ENST00000414817 517 ntBASIC5.35□□□□□ -1.55
MMP3P08254 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.35□□□□□ -1.55
MMP3P08254 FTLP19-201ENST00000433300 394 ntBASIC5.35□□□□□ -1.55
MMP3P08254 NPM1P29-201ENST00000483112 803 ntBASIC5.35□□□□□ -1.55
MMP3P08254 AC108729.1-201ENST00000487812 947 ntBASIC5.35□□□□□ -1.55
MMP3P08254 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.35□□□□□ -1.55
MMP3P08254 GTF2IP9-201ENST00000502460 301 ntBASIC5.35□□□□□ -1.55
MMP3P08254 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.35□□□□□ -1.55
MMP3P08254 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.35□□□□□ -1.55
MMP3P08254 AC100784.1-201ENST00000522790 310 ntBASIC5.35□□□□□ -1.55
MMP3P08254 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.35□□□□□ -1.55
MMP3P08254 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.35□□□□□ -1.55
MMP3P08254 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.35□□□□□ -1.55
MMP3P08254 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.35□□□□□ -1.55
MMP3P08254 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC5.35□□□□□ -1.55
MMP3P08254 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.35□□□□□ -1.55
MMP3P08254 ATP5J2P6-201ENST00000565203 266 ntBASIC5.35□□□□□ -1.55
MMP3P08254 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.35□□□□□ -1.55
MMP3P08254 MIR4277-201ENST00000578298 84 ntBASIC5.35□□□□□ -1.55
MMP3P08254 SNORA74C-1-201ENST00000580726 201 ntBASIC5.35□□□□□ -1.55
MMP3P08254 AL360012.1-201ENST00000602813 131 ntBASIC5.35□□□□□ -1.55
MMP3P08254 AC090617.9-201ENST00000623751 147 ntBASIC5.35□□□□□ -1.55
MMP3P08254 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MMP3P08254 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.35□□□□□ -1.55
MMP3P08254 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.35□□□□□ -1.55
MMP3P08254 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
MMP3P08254 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
MMP3P08254 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MMP3P08254 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
MMP3P08254 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MMP3P08254 AC139713.2-214ENST00000642059 1811 ntBASIC5.34□□□□□ -1.55
MMP3P08254 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
MMP3P08254 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
MMP3P08254 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
MMP3P08254 AC025574.1-201ENST00000554784 1653 ntBASIC5.34□□□□□ -1.55
MMP3P08254 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.34□□□□□ -1.55
MMP3P08254 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.34□□□□□ -1.55
MMP3P08254 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
MMP3P08254 AL137100.1-201ENST00000556703 1620 ntBASIC5.34□□□□□ -1.55
MMP3P08254 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
MMP3P08254 MTCO1P4-201ENST00000520516 1409 ntBASIC5.34□□□□□ -1.55
MMP3P08254 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MMP3P08254 FAM3C2-201ENST00000312214 681 ntBASIC5.34□□□□□ -1.55
MMP3P08254 SNORA70.2-201ENST00000364506 135 ntBASIC5.34□□□□□ -1.55
MMP3P08254 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
MMP3P08254 RNU1-82P-201ENST00000390851 165 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms