Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RN7SKP149-201ENST00000363008 344 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 RN7SKP115-201ENST00000363177 317 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 RNU6-618P-201ENST00000363518 112 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AL645927.1-201ENST00000396783 406 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 ST13P16-201ENST00000401760 781 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 RNA5SP113-201ENST00000410486 84 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AL158073.1-201ENST00000426848 1104 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 NRBF2P3-201ENST00000432731 865 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 RPL12P46-201ENST00000436610 195 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 RPL5P13-201ENST00000462840 709 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 RNU6-347P-201ENST00000516658 105 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 MTCYBP19-201ENST00000517463 1124 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AP000676.2-201ENST00000529711 301 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC010200.2-201ENST00000605098 235 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC090948.2-201ENST00000607363 564 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC009704.2-201ENST00000618739 483 ntBASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LRRC40Q9H9A6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AL451142.2-201ENST00000429076 2090 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 RN7SKP267-201ENST00000410381 285 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 Z74021.1-201ENST00000423610 407 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 PPIAP13-201ENST00000434706 478 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 PSMD10P3-201ENST00000437000 448 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC018638.3-201ENST00000461273 132 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC110749.1-201ENST00000462007 357 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 HMGB1P19-201ENST00000517578 577 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC008676.3-201ENST00000521237 435 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AP001880.2-201ENST00000538233 448 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 MIR3667-201ENST00000581025 74 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AL512782.1-201ENST00000603093 364 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 MIR7155-201ENST00000615925 56 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC131238.1-201ENST00000617135 328 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC140113.4-201ENST00000622087 222 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AL355480.1-201ENST00000629041 99 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AL672167.1-203ENST00000641299 2975 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 AC092435.4-201ENST00000623012 4159 ntBASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LRRC40Q9H9A6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AL355852.1-201ENST00000454081 1771 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 RNA5SP191-201ENST00000362585 102 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 RNU6-304P-201ENST00000364855 107 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 MIR105-2-201ENST00000385083 81 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 SNORD96B-201ENST00000386148 79 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms