Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AC137768.1-201ENST00000549998 553 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AL137072.1-201ENST00000603444 466 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 AL161616.1-201ENST00000611867 286 ntBASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.16□□□□□ -1.58
CCSER1Q9C0I3 UGT2B26P-201ENST00000508672 1613 ntBASIC5.15□□□□□ -1.58
CCSER1Q9C0I3 AC087565.3-202ENST00000642085 1603 ntBASIC5.15□□□□□ -1.58
CCSER1Q9C0I3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CCSER1Q9C0I3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCSER1Q9C0I3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.15□□□□□ -1.58
CCSER1Q9C0I3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CCSER1Q9C0I3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CCSER1Q9C0I3 AC021146.4-201ENST00000309229 279 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 RNU6-891P-201ENST00000384280 111 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 MIR195-201ENST00000385194 87 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 SDHCP2-201ENST00000398565 501 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AL450263.2-201ENST00000439400 589 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AL138878.2-201ENST00000440581 1241 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 NPM1P39-201ENST00000449818 867 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 RPL23AP65-201ENST00000475608 468 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 RNA5SP464-201ENST00000516251 108 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 SEC11B-201ENST00000518383 499 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 CYCSP28-201ENST00000534284 321 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 EIF1AXP2-201ENST00000555940 413 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 ATP5J2P6-201ENST00000565203 266 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AC233702.9-201ENST00000581528 203 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AC091178.1-203ENST00000584586 279 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AC019131.2-201ENST00000609071 870 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 OR51H2P-202ENST00000641424 3046 ntBASIC5.15□□□□□ -1.59
CCSER1Q9C0I3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 SNORD65-201ENST00000391079 73 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 CYB5AP4-201ENST00000396692 399 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 RAD23BP1-201ENST00000421404 1227 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 AJ239321.1-201ENST00000424255 564 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 AC092447.2-201ENST00000435487 669 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 RPL21P7-201ENST00000557463 483 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 AL390726.5-202ENST00000564800 256 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 ADAD1P2-201ENST00000588476 646 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 AC020915.5-201ENST00000596836 964 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 AC008966.2-201ENST00000606157 453 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 MIR6820-201ENST00000611508 62 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 AC110792.3-201ENST00000595906 1614 ntBASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.14□□□□□ -1.59
CCSER1Q9C0I3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 CASC19-204ENST00000641001 2055 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 MIR192-201ENST00000384915 110 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms