Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 LINC02019-201ENST00000608605 2060 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 MFSD8-217ENST00000641178 4374 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SKP45-201ENST00000363509 304 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SKP162-201ENST00000363605 345 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RNU6-960P-201ENST00000364056 120 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RNU4-50P-201ENST00000364361 141 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SNORD113-1-201ENST00000365321 69 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RNU6-214P-201ENST00000384130 107 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 Y_RNA.464-201ENST00000384282 110 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RNU6-729P-201ENST00000384399 107 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL031864.1-201ENST00000392075 423 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SKP126-201ENST00000411143 300 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC019181.1-201ENST00000417151 310 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 BPI-202ENST00000417318 1082 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 HCG25-217ENST00000422366 702 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 PTPN2P1-201ENST00000423212 1072 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RPL23AP34-201ENST00000423483 410 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC011999.1-201ENST00000424794 1024 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RPL7P2-201ENST00000427639 268 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 GAPDHP32-201ENST00000433816 998 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL353597.2-202ENST00000434901 373 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RHOT1P3-201ENST00000436571 331 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 TMSB4XP3-201ENST00000445144 114 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL135924.1-201ENST00000446146 423 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 MYL6P1-201ENST00000449877 453 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RPL23AP60-201ENST00000450011 454 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SL496P-201ENST00000470372 290 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RPL23AP8-201ENST00000479812 475 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RN7SL416P-201ENST00000494042 298 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 CEACAMP10-202ENST00000495431 496 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 TECRP2-201ENST00000503270 928 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC112484.3-201ENST00000505910 329 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 MRPL57P6-201ENST00000506570 309 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC106794.2-201ENST00000513713 632 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC106774.1-201ENST00000515105 321 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC097486.1-201ENST00000515331 210 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RNU6-570P-201ENST00000517051 105 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 RNU6-685P-201ENST00000517088 95 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC006927.1-201ENST00000544818 498 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC079384.1-201ENST00000548506 600 ntTSL 4 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL023284.4-201ENST00000564248 374 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC040162.2-201ENST00000573092 157 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC093826.2-201ENST00000579042 108 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC114488.2-208ENST00000591592 578 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL645949.1-202ENST00000600073 242 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL122127.1-201ENST00000603832 327 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL356458.1-201ENST00000604764 465 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ST7-OT4_3.1-201ENST00000615542 293 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC069234.4-201ENST00000621276 412 ntBASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 SYNJ1-201ENST00000357345 7059 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC4.03□□□□□ -1.76
KRTAP3-1Q9BYR8 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms