Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 CLN8-201ENST00000331222 7169 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 C4orf3-201ENST00000399075 2960 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 SALL1-201ENST00000251020 5146 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC002480.2-201ENST00000435127 2432 ntTSL 2 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 NUPR1-201ENST00000324873 5491 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 GPR55-201ENST00000392039 1523 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 TSHR-203ENST00000541158 4566 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 MTSS1-205ENST00000518547 4944 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 IL22RA1-201ENST00000270800 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 CFAP65-202ENST00000341552 5953 ntAPPRIS P4 TSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 TRO-204ENST00000375041 3488 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 SLC9A1-201ENST00000263980 4516 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 TRO-208ENST00000420798 3613 ntTSL 2 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 SPOCD1-202ENST00000360482 3960 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 NLRP10-201ENST00000328600 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RBM44-202ENST00000409864 3449 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 PCDHA4-204ENST00000618834 10557 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 ZNF569-201ENST00000316950 4061 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 ME1-201ENST00000369705 3371 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 HNRNPA1L2-201ENST00000357495 3011 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RPS6KA1-216ENST00000530003 3023 ntTSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC009541.1-201ENST00000438279 2662 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 GPATCH4-201ENST00000368232 1972 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC097468.1-201ENST00000441450 1992 ntTSL 2 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 PEX5-202ENST00000266564 3170 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 TCAF2-204ENST00000441159 5568 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 TRMT10A-201ENST00000273962 3694 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 DCLK1-201ENST00000255448 5703 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RASGRP4-219ENST00000618320 3313 ntTSL 2 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RPL23P2-201ENST00000320371 421 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 MIRLET7A1-201ENST00000362295 80 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU5F-1-201ENST00000362507 117 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 Y_RNA.91-201ENST00000363042 107 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 Y_RNA.98-201ENST00000363109 102 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU6-666P-201ENST00000363499 107 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 Y_RNA.155-201ENST00000363632 101 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU6-944P-201ENST00000364023 107 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU1-85P-201ENST00000364127 164 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 SNORA71C-201ENST00000364642 134 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 Y_RNA.634-201ENST00000364811 113 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 CENPW-201ENST00000368325 528 ntTSL 3 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU6-793P-201ENST00000384233 104 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 U8.10-201ENST00000384260 133 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU6-724P-201ENST00000390958 105 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU6-630P-201ENST00000391258 106 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RN7SKP267-201ENST00000410381 285 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNA5SP475-201ENST00000410568 110 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU6-733P-201ENST00000410759 104 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNA5SP498-201ENST00000411342 120 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RN7SKP101-201ENST00000411376 320 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 ARHGAP42P2-201ENST00000416089 2140 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 TOMM22P1-201ENST00000418578 312 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RPL36AP10-201ENST00000421785 322 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC104794.1-201ENST00000425235 312 ntTSL 3 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 CICP10-201ENST00000439497 198 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RPS17P13-201ENST00000448974 407 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC010982.1-201ENST00000450325 465 ntTSL 4 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC013480.1-201ENST00000451514 346 ntTSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL365436.1-201ENST00000452587 495 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL591473.1-201ENST00000464297 313 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RN7SL791P-201ENST00000467868 295 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RN7SL63P-201ENST00000468228 304 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC092865.4-201ENST00000477936 615 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC016968.1-201ENST00000479610 697 ntTSL 3 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 ATP5LP5-201ENST00000483050 299 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RPL10P7-201ENST00000495649 625 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RPL7AP57-201ENST00000497708 784 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNU6-488P-201ENST00000515918 99 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 RNA5SP422-201ENST00000516778 111 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 DEFB108D-201ENST00000527787 222 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AP003174.3-201ENST00000537926 516 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC091304.5-201ENST00000568969 158 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC243312.1-201ENST00000570582 275 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC006441.4-201ENST00000583161 636 ntTSL 3 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC233702.11-201ENST00000598588 333 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 EDRF1-AS1-205ENST00000601363 712 ntTSL 5 BASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AL356575.1-201ENST00000603008 283 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 MRPL57P1-201ENST00000621486 265 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC090617.7-201ENST00000623952 126 ntBASIC3.24□□□□□ -1.89
KRTAP4-9Q9BYQ8 AC103706.3-201ENST00000636297 85 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms