Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC093311.1-201ENST00000506586 2021 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 EI24P3-201ENST00000399046 1062 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 MTCYBP36-201ENST00000404146 440 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 NPM1P4-201ENST00000414095 812 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AL035422.1-201ENST00000414193 397 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 MTND3P23-201ENST00000431980 347 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 SNRPEP8-201ENST00000442866 260 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 HIGD1AP16-201ENST00000450986 258 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC098824.1-201ENST00000453565 980 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AL035404.1-201ENST00000497982 568 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 RNA5SP473-201ENST00000516402 125 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC239860.2-201ENST00000525886 270 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AP005639.1-201ENST00000526939 192 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC084121.1-201ENST00000533882 835 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AP001004.1-201ENST00000582468 324 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 BNIP3P33-201ENST00000598912 569 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AP000860.1-201ENST00000605250 559 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AP004247.3-201ENST00000608682 624 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AL356274.1-201ENST00000617064 410 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC092650.2-201ENST00000619984 902 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC009120.7-201ENST00000623452 780 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC073592.6-201ENST00000624271 415 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC079228.1-201ENST00000624774 1049 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 CDR1-202ENST00000625883 1485 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC011369.2-201ENST00000624423 1567 ntBASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
PTCHD1Q96NR3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 MIR433-201ENST00000384837 93 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 GCNT1P4-201ENST00000404096 329 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 CYP4F30P-202ENST00000420048 405 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AL389915.1-201ENST00000422463 466 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AL354707.3-201ENST00000427308 331 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AL513175.1-201ENST00000431492 780 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 PSMD10P2-201ENST00000432890 672 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 CYCSP11-201ENST00000436426 315 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 PPIAP10-201ENST00000438675 458 ntBASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.87□□□□□ -1.47
PTCHD1Q96NR3 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms