Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNORA4.1-201ENST00000364263 144 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 Y_RNA.311-201ENST00000365068 96 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 SNORA75-201ENST00000384158 137 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 RN7SKP151-201ENST00000410230 316 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 RNU2-42P-201ENST00000410697 113 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC007899.1-201ENST00000412776 775 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 HMGA1P8-201ENST00000414130 321 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 BX284632.2-201ENST00000421091 399 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC007562.1-201ENST00000421819 517 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC004448.2-201ENST00000422360 586 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 RPL23AP4-201ENST00000427757 463 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 RPS25P9-201ENST00000435591 252 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AL512605.1-202ENST00000441919 381 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC023274.2-201ENST00000445264 521 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AL359955.2-201ENST00000445380 353 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC104306.1-201ENST00000449702 371 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AL591363.1-201ENST00000450091 483 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AL606490.1-201ENST00000452266 765 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC016724.1-201ENST00000453215 421 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC104164.1-201ENST00000460282 590 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 RPL23AP40-201ENST00000487630 390 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC090071.1-201ENST00000507713 644 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC010285.3-201ENST00000511668 676 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 RNU6-405P-201ENST00000516637 110 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 NANOGNBP2-201ENST00000544753 553 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 SNORD39.2-201ENST00000579995 76 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC067959.1-201ENST00000604334 379 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AL136131.3-201ENST00000607600 188 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC013476.2-201ENST00000614456 459 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 AC239868.2-201ENST00000564237 4527 ntBASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM48Q8IWZ4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 PARP4P2-201ENST00000446672 3326 ntBASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 ATP8A2P3-201ENST00000426792 1536 ntBASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 AC027088.4-201ENST00000611559 1947 ntBASIC5.84□□□□□ -1.48
TRIM48Q8IWZ4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC016583.1-201ENST00000624221 2431 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 Y_RNA.18-201ENST00000362461 102 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 RNU6-867P-201ENST00000364956 107 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 RNY3P10-201ENST00000384764 102 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AL034374.1-201ENST00000406329 351 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AL133264.1-201ENST00000407157 562 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 SNORA11C-201ENST00000408532 129 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 MIR1303-201ENST00000408625 86 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AC114814.2-201ENST00000419195 485 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 PTP4A1P1-201ENST00000420539 515 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 MGAT2P2-201ENST00000427194 797 ntBASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM48Q8IWZ4 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms