Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HMGCLP35914 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCLP35914 RCC2P2-201ENST00000422174 918 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCLP35914 RSL24D1P8-201ENST00000434442 492 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCLP35914 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCLP35914 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCLP35914 AL513533.1-201ENST00000453728 415 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCLP35914 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCLP35914 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCLP35914 AL445433.1-201ENST00000457507 257 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 SCARNA10-201ENST00000459255 330 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 AC010326.1-201ENST00000462726 602 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 AC112206.1-201ENST00000468416 477 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 AC104763.1-201ENST00000475274 360 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
HMGCLP35914 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
HMGCLP35914 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
HMGCLP35914 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCLP35914 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCLP35914 OR5M2P-201ENST00000529003 936 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCLP35914 AC009268.1-201ENST00000561352 1203 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 AC015912.2-201ENST00000571053 181 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.64□□□□□ -1.67
HMGCLP35914 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCLP35914 AC068790.7-201ENST00000602347 528 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCLP35914 AC100827.5-201ENST00000615883 426 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 U3.53-201ENST00000628922 216 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCLP35914 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.64□□□□□ -1.67
HMGCLP35914 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCLP35914 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.64□□□□□ -1.67
HMGCLP35914 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCLP35914 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HMGCLP35914 AP000542.2-201ENST00000623199 6179 ntBASIC4.64□□□□□ -1.67
HMGCLP35914 AL133268.1-201ENST00000405676 1401 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 AC093535.2-201ENST00000624769 2326 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 AC125257.1-201ENST00000560400 2930 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCLP35914 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCLP35914 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCLP35914 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGCLP35914 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCLP35914 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCLP35914 RNU6-564P-201ENST00000410983 104 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.63□□□□□ -1.67
HMGCLP35914 TRIM60P13-201ENST00000432350 1283 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.63□□□□□ -1.67
HMGCLP35914 SBDSP1-204ENST00000453858 737 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 RPL31P53-201ENST00000457065 348 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCLP35914 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCLP35914 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCLP35914 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGCLP35914 AC007016.1-201ENST00000512110 244 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCLP35914 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGCLP35914 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HMGCLP35914 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCLP35914 AL049874.4-201ENST00000557593 255 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCLP35914 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.63□□□□□ -1.67
HMGCLP35914 AC022387.2-201ENST00000604050 448 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 IMMP1LP1-201ENST00000605170 488 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 COX6CP4-201ENST00000605798 228 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 AC097505.1-201ENST00000610199 565 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 AC004232.3-201ENST00000622977 525 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 MAPK10-286ENST00000641208 8747 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 AL592182.3-201ENST00000642132 3304 ntBASIC4.63□□□□□ -1.67
HMGCLP35914 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HMGCLP35914 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCLP35914 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCLP35914 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCLP35914 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HMGCLP35914 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCLP35914 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
HMGCLP35914 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCLP35914 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HMGCLP35914 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCLP35914 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCLP35914 AC103591.2-201ENST00000265259 766 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCLP35914 AL589826.1-201ENST00000340697 249 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 RNU6-1331P-201ENST00000363658 106 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 SNORA71.2-201ENST00000364941 134 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 RNU6-178P-201ENST00000384631 104 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HMGCLP35914 RNA5SP397-201ENST00000391323 118 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 SDHCP2-201ENST00000398565 501 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 MIR921-201ENST00000401133 56 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 RPS24P12-201ENST00000402084 394 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 RNU2-50P-201ENST00000410494 143 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 AL590609.2-201ENST00000421430 368 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 RPL21P43-201ENST00000425440 472 ntBASIC4.62□□□□□ -1.67
HMGCLP35914 AL392003.1-201ENST00000434394 243 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms