Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 OR5B10P-201ENST00000532869 642 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.25□□□□□ -1.41
COL8A1P27658 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.25□□□□□ -1.41
COL8A1P27658 AC006512.2-201ENST00000543250 486 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.25□□□□□ -1.41
COL8A1P27658 CYCSP2-201ENST00000558168 301 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.25□□□□□ -1.41
COL8A1P27658 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.25□□□□□ -1.41
COL8A1P27658 RN7SL230P-201ENST00000580835 303 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
COL8A1P27658 AC110743.1-201ENST00000584870 478 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 RPL7AP69-201ENST00000595306 806 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 AC245389.1-201ENST00000605141 529 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 AC097468.3-201ENST00000607956 456 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
COL8A1P27658 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
COL8A1P27658 TNFSF15-201ENST00000374044 2789 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 AP002364.1-201ENST00000623330 3386 ntBASIC6.25□□□□□ -1.41
COL8A1P27658 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
COL8A1P27658 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.25□□□□□ -1.41
COL8A1P27658 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL8A1P27658 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
COL8A1P27658 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
COL8A1P27658 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC6.24□□□□□ -1.41
COL8A1P27658 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL8A1P27658 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL8A1P27658 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL8A1P27658 UG0898H09-202ENST00000623646 7040 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL8A1P27658 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.24□□□□□ -1.41
COL8A1P27658 ZNF812P-201ENST00000457674 1694 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 AL359854.1-201ENST00000614203 1594 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL8A1P27658 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL8A1P27658 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL8A1P27658 RNA5SP472-201ENST00000363868 119 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 RN7SKP237-201ENST00000364663 301 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 AL589647.1-201ENST00000402485 466 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 RPL7P25-201ENST00000404151 721 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 RNU6-370P-201ENST00000411008 104 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC127391.1-201ENST00000411737 98 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 AC013404.1-201ENST00000413068 249 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL8A1P27658 AC234782.4-201ENST00000417646 1048 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC6.24□□□□□ -1.41
COL8A1P27658 AP001324.1-201ENST00000428553 399 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 RPL34P6-201ENST00000432390 345 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC110602.1-201ENST00000437414 318 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.24□□□□□ -1.41
COL8A1P27658 AL121578.2-201ENST00000448797 447 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 RPS4XP10-201ENST00000465034 731 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC092324.1-201ENST00000468671 324 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC233724.1-201ENST00000503894 233 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC010350.1-201ENST00000504908 231 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 AC008945.1-201ENST00000505144 499 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC113367.2-201ENST00000505749 160 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC091885.1-201ENST00000506658 268 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.24□□□□□ -1.41
COL8A1P27658 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 SCARNA20.1-201ENST00000516009 138 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 RNY3P15-201ENST00000516297 97 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC022868.1-201ENST00000517767 391 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 COX6B1P4-201ENST00000519826 484 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.24□□□□□ -1.41
COL8A1P27658 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.24□□□□□ -1.41
COL8A1P27658 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 AC138915.2-201ENST00000569776 97 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL8A1P27658 TPMTP1-201ENST00000592307 737 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC006967.3-201ENST00000594086 1093 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.24□□□□□ -1.41
COL8A1P27658 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AL359704.2-201ENST00000604335 521 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 ATP1B3P1-201ENST00000605365 821 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AL121809.2-201ENST00000613169 341 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AL133173.2-201ENST00000614270 90 ntBASIC6.24□□□□□ -1.41
COL8A1P27658 AC096861.1-201ENST00000616652 240 ntBASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms