Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.66□□□□□ -1.66
SNX3O60493 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNX3O60493 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.65□□□□□ -1.66
SNX3O60493 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.65□□□□□ -1.66
SNX3O60493 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX3O60493 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
SNX3O60493 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX3O60493 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX3O60493 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
SNX3O60493 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX3O60493 RN7SKP275-201ENST00000364626 301 ntBASIC4.65□□□□□ -1.67
SNX3O60493 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX3O60493 RNU2-17P-201ENST00000410290 190 ntBASIC4.65□□□□□ -1.67
SNX3O60493 RNU4-27P-201ENST00000410889 139 ntBASIC4.65□□□□□ -1.67
SNX3O60493 RNA5SP104-201ENST00000410989 118 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.65□□□□□ -1.67
SNX3O60493 TATDN1P1-201ENST00000414123 891 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX3O60493 CYCSP12-201ENST00000437729 300 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX3O60493 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX3O60493 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX3O60493 AC007998.1-201ENST00000474156 672 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX3O60493 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX3O60493 AC025445.1-201ENST00000502728 300 ntBASIC4.65□□□□□ -1.67
SNX3O60493 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX3O60493 HMGN1P15-201ENST00000513870 295 ntBASIC4.65□□□□□ -1.67
SNX3O60493 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX3O60493 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX3O60493 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.65□□□□□ -1.67
SNX3O60493 OR4A46P-201ENST00000527255 933 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX3O60493 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.65□□□□□ -1.67
SNX3O60493 OR10G5P-201ENST00000532733 358 ntBASIC4.65□□□□□ -1.67
SNX3O60493 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.65□□□□□ -1.67
SNX3O60493 NMNAT1P1-201ENST00000554095 876 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AC093510.2-201ENST00000562820 896 ntBASIC4.65□□□□□ -1.67
SNX3O60493 SS18L2P2-201ENST00000583960 235 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AC079880.2-201ENST00000603790 1213 ntBASIC4.65□□□□□ -1.67
SNX3O60493 SUGT1P3-202ENST00000604259 383 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AL121932.1-201ENST00000605542 214 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AC008966.2-201ENST00000606157 453 ntBASIC4.65□□□□□ -1.67
SNX3O60493 AC009779.8-202ENST00000607990 932 ntBASIC4.65□□□□□ -1.67
SNX3O60493 MIR7109-201ENST00000613748 65 ntBASIC4.65□□□□□ -1.67
SNX3O60493 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX3O60493 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SNX3O60493 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX3O60493 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SNX3O60493 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.65□□□□□ -1.67
SNX3O60493 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX3O60493 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX3O60493 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SNX3O60493 AL031119.1-201ENST00000404707 1879 ntBASIC4.64□□□□□ -1.67
SNX3O60493 CASC19-284ENST00000642142 1868 ntBASIC4.64□□□□□ -1.67
SNX3O60493 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX3O60493 AL592182.3-201ENST00000642132 3304 ntBASIC4.64□□□□□ -1.67
SNX3O60493 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX3O60493 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SNX3O60493 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SNX3O60493 AC067945.1-201ENST00000342609 618 ntBASIC4.64□□□□□ -1.67
SNX3O60493 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX3O60493 RNA5SP22-201ENST00000365393 109 ntBASIC4.64□□□□□ -1.67
SNX3O60493 MIR320B1-201ENST00000390209 79 ntBASIC4.64□□□□□ -1.67
SNX3O60493 RPS27AP11-201ENST00000402798 447 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.64□□□□□ -1.67
SNX3O60493 AC092570.3-201ENST00000420113 693 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SNX3O60493 MTCO2P1-201ENST00000424648 477 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX3O60493 AL353748.1-201ENST00000440753 474 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX3O60493 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX3O60493 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 MTCO2P9-201ENST00000503214 694 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.64□□□□□ -1.67
SNX3O60493 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.64□□□□□ -1.67
SNX3O60493 RNU6-1004P-201ENST00000516584 111 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX3O60493 AC013701.1-201ENST00000522657 465 ntBASIC4.64□□□□□ -1.67
SNX3O60493 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SNX3O60493 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.64□□□□□ -1.67
SNX3O60493 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SNX3O60493 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.64□□□□□ -1.67
SNX3O60493 AC124068.1-201ENST00000563131 678 ntBASIC4.64□□□□□ -1.67
SNX3O60493 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms