Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DTX4Q9Y2E6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DTX4Q9Y2E6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
DTX4Q9Y2E6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DTX4Q9Y2E6 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DTX4Q9Y2E6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
DTX4Q9Y2E6 CASC19-284ENST00000642142 1868 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 STX3-208ENST00000641815 3236 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 Y_RNA.472-201ENST00000384322 102 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 RNU6-636P-201ENST00000384598 107 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 MTCO1P56-201ENST00000401674 224 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AL136310.1-201ENST00000404926 654 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 RN7SKP278-201ENST00000410504 342 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AL390774.1-201ENST00000411924 246 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 TAF13P2-201ENST00000416876 286 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 YWHAEP5-201ENST00000431545 765 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 CFL1P1-202ENST00000432948 411 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 NPM1P33-201ENST00000438918 872 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 RNU7-140P-201ENST00000459546 60 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 PSAT1P4-201ENST00000466500 526 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC058823.1-201ENST00000485315 474 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 RN7SL629P-201ENST00000489622 285 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 IGBP1P4-201ENST00000503202 879 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 IMPA1P1-201ENST00000510718 842 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 PRELID3BP4-201ENST00000515476 571 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 AP002373.2-201ENST00000541631 1060 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC126177.5-201ENST00000549599 178 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 SMARCE1P3-201ENST00000553649 1231 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC007225.2-201ENST00000562529 256 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 AL451064.1-201ENST00000607718 471 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC244107.2-201ENST00000611773 76 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 STMN1P1-201ENST00000617809 440 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AP001005.3-201ENST00000622049 129 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 MTND4P8-201ENST00000514997 1362 ntBASIC5□□□□□ -1.61
DTX4Q9Y2E6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5□□□□□ -1.61
DTX4Q9Y2E6 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
DTX4Q9Y2E6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 RNU6-353P-201ENST00000364266 108 ntBASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 RNU6-549P-201ENST00000384433 107 ntBASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 RNA5SP339-201ENST00000390987 122 ntBASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 AC009804.1-201ENST00000400949 179 ntBASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 SNORA11B-201ENST00000408175 129 ntBASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 RN7SKP247-201ENST00000411094 308 ntBASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 RPS24P7-201ENST00000416921 246 ntBASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 AC010099.3-201ENST00000423896 409 ntBASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.99□□□□□ -1.61
DTX4Q9Y2E6 RPL12P17-201ENST00000432393 498 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms