Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL358832.1-201ENST00000497800 389 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AL606490.9-201ENST00000603331 271 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 OR7A19P-201ENST00000608051 733 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AC009159.1-201ENST00000618386 642 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AL158163.1-201ENST00000603915 1649 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 OR52E6-202ENST00000379946 954 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 VN1R48P-201ENST00000448149 1036 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AC074250.1-201ENST00000511117 192 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AC108359.1-201ENST00000616451 1211 ntBASIC4.23□□□□□ -1.73
CHD8Q9HCK8 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CHD8Q9HCK8 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 SRIP2-201ENST00000428470 166 ntBASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AC118465.1-201ENST00000513820 1271 ntBASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 COX6B1P6-201ENST00000522347 255 ntBASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 WBP11P1-201ENST00000562560 1931 ntBASIC4.22□□□□□ -1.73
CHD8Q9HCK8 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AC008033.1-201ENST00000216407 1162 ntBASIC4.22□□□□□ -1.73
CHD8Q9HCK8 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AC093719.1-202ENST00000392735 373 ntBASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AJ239321.1-201ENST00000424255 564 ntBASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AC073052.1-201ENST00000440417 714 ntBASIC4.22□□□□□ -1.73
CHD8Q9HCK8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 BNIP3P35-201ENST00000604530 490 ntBASIC4.22□□□□□ -1.73
CHD8Q9HCK8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
CHD8Q9HCK8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 AC011504.1-201ENST00000623331 4103 ntBASIC4.21□□□□□ -1.73
CHD8Q9HCK8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 MFSD13B-201ENST00000420133 1290 ntBASIC4.21□□□□□ -1.73
CHD8Q9HCK8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 RN7SL691P-201ENST00000494487 301 ntBASIC4.21□□□□□ -1.73
CHD8Q9HCK8 KCTD9P2-201ENST00000512203 1013 ntBASIC4.21□□□□□ -1.73
CHD8Q9HCK8 RN7SKP57-201ENST00000517248 293 ntBASIC4.21□□□□□ -1.73
CHD8Q9HCK8 RNU6-709P-201ENST00000517257 104 ntBASIC4.21□□□□□ -1.73
CHD8Q9HCK8 SEPT10P1-201ENST00000517342 1162 ntBASIC4.21□□□□□ -1.73
CHD8Q9HCK8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 AC090912.3-201ENST00000609775 533 ntBASIC4.21□□□□□ -1.73
CHD8Q9HCK8 AL354798.1-201ENST00000622505 329 ntBASIC4.21□□□□□ -1.73
CHD8Q9HCK8 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CHD8Q9HCK8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 AC004817.4-201ENST00000602396 3625 ntBASIC4.21□□□□□ -1.74
CHD8Q9HCK8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.21□□□□□ -1.74
CHD8Q9HCK8 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms