Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RNU6-890P-201ENST00000384121 107 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 MIR558-201ENST00000384920 94 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 RNU6-1109P-201ENST00000391187 107 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 MSRB1P1-201ENST00000396851 354 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 MIR548M-201ENST00000408260 86 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AL031663.1-201ENST00000437445 219 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 LINC00350-201ENST00000438640 422 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 ELOBP1-201ENST00000447693 357 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AL035090.1-201ENST00000454835 332 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 SNRPD2P1-201ENST00000489253 354 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 HIGD1AP14-201ENST00000507617 282 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC079140.5-201ENST00000507882 310 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC090136.1-201ENST00000520009 240 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC109635.4-202ENST00000531666 412 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC022882.1-201ENST00000532142 501 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AP003119.1-201ENST00000533437 538 ntTSL 4 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC104695.3-201ENST00000604052 296 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AL359704.2-201ENST00000604335 521 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC104662.1-201ENST00000604448 511 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC011890.2-201ENST00000613393 294 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC008013.2-202ENST00000637965 364 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 AL133279.3-201ENST00000563140 2352 ntBASIC6.99□□□□□ -1.29
USB1Q9BQ65 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
USB1Q9BQ65 STC1-201ENST00000290271 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
USB1Q9BQ65 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 CTAGE11P-201ENST00000451540 2353 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AC016251.2-201ENST00000623393 3089 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AC022507.1-201ENST00000548349 1505 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AMOT-204ENST00000371962 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 PHACTR1-204ENST00000379348 795 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
USB1Q9BQ65 MIR128-2-201ENST00000384893 84 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 MIR106B-201ENST00000385301 82 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 AL391419.1-201ENST00000398901 1275 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 RPS10P18-201ENST00000442662 495 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.98□□□□□ -1.29
USB1Q9BQ65 AL118520.1-201ENST00000450770 291 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 GSTA11P-201ENST00000452866 669 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 SNRPFP3-201ENST00000457792 225 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 RPL22P13-201ENST00000493291 347 ntBASIC6.98□□□□□ -1.29
USB1Q9BQ65 VN1R104P-201ENST00000505115 1009 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms