Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RIPK4P57078 ELOCP28-201ENST00000590044 317 ntBASIC5.86□□□□□ -1.47
RIPK4P57078 AC090948.1-201ENST00000607464 549 ntBASIC5.86□□□□□ -1.47
RIPK4P57078 MIR378J-201ENST00000611988 109 ntBASIC5.86□□□□□ -1.47
RIPK4P57078 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RIPK4P57078 AC006065.6-201ENST00000625201 545 ntBASIC5.86□□□□□ -1.47
RIPK4P57078 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.86□□□□□ -1.47
RIPK4P57078 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.86□□□□□ -1.47
RIPK4P57078 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.86□□□□□ -1.47
RIPK4P57078 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.86□□□□□ -1.47
RIPK4P57078 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RIPK4P57078 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.86□□□□□ -1.47
RIPK4P57078 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
RIPK4P57078 PROS2P-201ENST00000474651 1951 ntBASIC5.86□□□□□ -1.47
RIPK4P57078 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RIPK4P57078 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
RIPK4P57078 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RIPK4P57078 RNU1-63P-201ENST00000383902 164 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 RPL12P34-201ENST00000424532 479 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.85□□□□□ -1.47
RIPK4P57078 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RIPK4P57078 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RIPK4P57078 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.85□□□□□ -1.47
RIPK4P57078 DHFRP3-201ENST00000455595 559 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.85□□□□□ -1.47
RIPK4P57078 AC011276.1-201ENST00000469688 323 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.85□□□□□ -1.47
RIPK4P57078 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.85□□□□□ -1.47
RIPK4P57078 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.85□□□□□ -1.47
RIPK4P57078 AC010476.1-201ENST00000519111 851 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.85□□□□□ -1.47
RIPK4P57078 AP002360.3-201ENST00000607673 710 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 AL035461.2-201ENST00000619201 524 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 AC091905.2-201ENST00000623143 306 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 AC079298.2-201ENST00000623885 459 ntBASIC5.85□□□□□ -1.47
RIPK4P57078 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.85□□□□□ -1.47
RIPK4P57078 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.85□□□□□ -1.47
RIPK4P57078 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.85□□□□□ -1.47
RIPK4P57078 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.85□□□□□ -1.47
RIPK4P57078 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RIPK4P57078 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
RIPK4P57078 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.84□□□□□ -1.47
RIPK4P57078 AL132656.3-201ENST00000606384 1595 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
RIPK4P57078 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RIPK4P57078 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RIPK4P57078 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.84□□□□□ -1.47
RIPK4P57078 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RIPK4P57078 FAM3C2-201ENST00000312214 681 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 AC004690.1-201ENST00000418216 328 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.84□□□□□ -1.47
RIPK4P57078 FHP1-201ENST00000442741 703 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 EIF2S2P2-201ENST00000447161 982 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 RPL23AP24-201ENST00000458203 385 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 CEACAMP10-202ENST00000495431 496 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 AC134698.5-201ENST00000519444 336 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RIPK4P57078 HMGB2P1-201ENST00000591146 634 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 AC233280.2-201ENST00000603917 1070 ntBASIC5.84□□□□□ -1.47
RIPK4P57078 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RIPK4P57078 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RIPK4P57078 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.84□□□□□ -1.48
RIPK4P57078 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RIPK4P57078 AC120036.2-201ENST00000509729 1474 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RIPK4P57078 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIPK4P57078 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.83□□□□□ -1.48
RIPK4P57078 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIPK4P57078 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIPK4P57078 AC068254.2-201ENST00000623938 3577 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIPK4P57078 RNU6-673P-201ENST00000365084 104 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RIPK4P57078 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.83□□□□□ -1.48
RIPK4P57078 AC010740.1-201ENST00000417035 684 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 UBE2V1P3-201ENST00000439651 417 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 NIP7P2-201ENST00000485801 544 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 HPRT1P1-201ENST00000509498 657 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RIPK4P57078 RN7SKP46-201ENST00000515942 234 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 RNA5SP497-201ENST00000516081 97 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIPK4P57078 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.83□□□□□ -1.48
RIPK4P57078 MIR4284-201ENST00000578924 81 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 MIR6758-201ENST00000620653 63 ntBASIC5.83□□□□□ -1.48
RIPK4P57078 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.83□□□□□ -1.48
RIPK4P57078 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RIPK4P57078 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.83□□□□□ -1.48
RIPK4P57078 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
RIPK4P57078 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIPK4P57078 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.83□□□□□ -1.48
RIPK4P57078 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
RIPK4P57078 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC5.83□□□□□ -1.48
RIPK4P57078 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIPK4P57078 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RIPK4P57078 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RIPK4P57078 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.82□□□□□ -1.48
RIPK4P57078 AL592182.3-201ENST00000642132 3304 ntBASIC5.82□□□□□ -1.48
RIPK4P57078 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms