Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TNFP01375 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TNFP01375 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
TNFP01375 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
TNFP01375 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TNFP01375 THAP12P5-201ENST00000405864 2275 ntBASIC4.39□□□□□ -1.71
TNFP01375 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TNFP01375 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
TNFP01375 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.39□□□□□ -1.71
TNFP01375 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TNFP01375 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.39□□□□□ -1.71
TNFP01375 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.38□□□□□ -1.71
TNFP01375 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 OR51H2P-202ENST00000641424 3046 ntBASIC4.38□□□□□ -1.71
TNFP01375 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.38□□□□□ -1.71
TNFP01375 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TNFP01375 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TNFP01375 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 RNU1-130P-201ENST00000363930 160 ntBASIC4.38□□□□□ -1.71
TNFP01375 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 CTSL3P-202ENST00000412179 788 ntBASIC4.38□□□□□ -1.71
TNFP01375 SETP15-201ENST00000412724 337 ntBASIC4.38□□□□□ -1.71
TNFP01375 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.38□□□□□ -1.71
TNFP01375 RPL23AP25-201ENST00000430973 463 ntBASIC4.38□□□□□ -1.71
TNFP01375 RPS26P2-201ENST00000440331 348 ntBASIC4.38□□□□□ -1.71
TNFP01375 CYCSP34-201ENST00000458172 304 ntBASIC4.38□□□□□ -1.71
TNFP01375 AC103987.1-201ENST00000473394 348 ntBASIC4.38□□□□□ -1.71
TNFP01375 RPS27AP16-201ENST00000492222 470 ntBASIC4.38□□□□□ -1.71
TNFP01375 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.38□□□□□ -1.71
TNFP01375 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.38□□□□□ -1.71
TNFP01375 OR8G5-201ENST00000524943 1041 ntBASIC4.38□□□□□ -1.71
TNFP01375 ATP5J2P6-201ENST00000565203 266 ntBASIC4.38□□□□□ -1.71
TNFP01375 DPRXP4-201ENST00000578053 568 ntBASIC4.38□□□□□ -1.71
TNFP01375 SS18L2P2-201ENST00000583960 235 ntBASIC4.38□□□□□ -1.71
TNFP01375 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.38□□□□□ -1.71
TNFP01375 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.38□□□□□ -1.71
TNFP01375 ARF4P1-201ENST00000605447 541 ntBASIC4.38□□□□□ -1.71
TNFP01375 uc_338.13-201ENST00000618243 179 ntBASIC4.38□□□□□ -1.71
TNFP01375 AP000843.1-201ENST00000624880 701 ntBASIC4.38□□□□□ -1.71
TNFP01375 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.38□□□□□ -1.71
TNFP01375 OR52H1-202ENST00000641796 1061 ntBASIC4.38□□□□□ -1.71
TNFP01375 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TNFP01375 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TNFP01375 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.38□□□□□ -1.71
TNFP01375 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 MFSD8-220ENST00000641243 1422 ntBASIC4.38□□□□□ -1.71
TNFP01375 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
TNFP01375 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.37□□□□□ -1.71
TNFP01375 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TNFP01375 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 AC139769.1-204ENST00000472297 1931 ntBASIC4.37□□□□□ -1.71
TNFP01375 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.37□□□□□ -1.71
TNFP01375 MIR3065-201ENST00000390137 79 ntBASIC4.37□□□□□ -1.71
TNFP01375 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFP01375 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.37□□□□□ -1.71
TNFP01375 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.37□□□□□ -1.71
TNFP01375 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.37□□□□□ -1.71
TNFP01375 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.37□□□□□ -1.71
TNFP01375 ACTR3P2-201ENST00000439585 1257 ntBASIC4.37□□□□□ -1.71
TNFP01375 DHFRP3-201ENST00000455595 559 ntBASIC4.37□□□□□ -1.71
TNFP01375 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.37□□□□□ -1.71
TNFP01375 PARP4P3-201ENST00000510265 317 ntBASIC4.37□□□□□ -1.71
TNFP01375 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.37□□□□□ -1.71
TNFP01375 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFP01375 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
TNFP01375 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.37□□□□□ -1.71
TNFP01375 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.37□□□□□ -1.71
TNFP01375 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFP01375 AC011477.5-201ENST00000586571 259 ntBASIC4.37□□□□□ -1.71
TNFP01375 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.37□□□□□ -1.71
TNFP01375 AC023762.1-201ENST00000603280 584 ntBASIC4.37□□□□□ -1.71
TNFP01375 AC113403.1-201ENST00000604910 193 ntBASIC4.37□□□□□ -1.71
TNFP01375 MIR8069-1-201ENST00000616627 86 ntBASIC4.37□□□□□ -1.71
TNFP01375 AL122125.1-201ENST00000616999 600 ntBASIC4.37□□□□□ -1.71
TNFP01375 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 MIR8069-2-201ENST00000621412 86 ntBASIC4.37□□□□□ -1.71
TNFP01375 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.37□□□□□ -1.71
TNFP01375 AC027290.2-201ENST00000623210 18662 ntBASIC4.37□□□□□ -1.71
TNFP01375 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.37□□□□□ -1.71
TNFP01375 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TNFP01375 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.37□□□□□ -1.71
TNFP01375 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFP01375 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.36□□□□□ -1.71
TNFP01375 AL672167.1-204ENST00000641875 3017 ntBASIC4.36□□□□□ -1.71
TNFP01375 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TNFP01375 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms