Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 MIR762-201ENST00000390236 83 ntBASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 MIR3960-201ENST00000583311 91 ntBASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 MED25-210ENST00000612854 801 ntTSL 5 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 MED25-214ENST00000622402 642 ntTSL 5 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 AC093525.10-201ENST00000625130 1569 ntBASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
LINC01558Q9Y6Z2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 AC126177.7-201ENST00000547904 679 ntBASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 FP325331.1-202ENST00000623531 1380 ntBASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
LINC01558Q9Y6Z2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
LINC01558Q9Y6Z2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms