Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
TNFRSF11AQ9Y6Q6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 Z82202.1-201ENST00000623446 1880 ntBASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 BX088651.1-201ENST00000540551 451 ntBASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TNFRSF11AQ9Y6Q6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 B3GAT3P1-201ENST00000471720 806 ntBASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AC104417.2-201ENST00000562989 1793 ntBASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 SDHAP1-207ENST00000440850 2000 ntBASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC23.87■■□□□ 1.41
TNFRSF11AQ9Y6Q6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AL390955.1-201ENST00000428694 934 ntBASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AL355355.2-201ENST00000442321 338 ntBASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AP000525.1-201ENST00000608286 694 ntBASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC23.86■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 KRT8P41-201ENST00000533985 1514 ntBASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 RCC2P6-201ENST00000526625 1557 ntBASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.85■■□□□ 1.41
TNFRSF11AQ9Y6Q6 KRT17P2-201ENST00000300992 1314 ntBASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC23.83■■□□□ 1.41
TNFRSF11AQ9Y6Q6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.83■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms