Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCA3PQ9Y6N3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 AC009237.14-201ENST00000609975 1594 ntBASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CLCA3PQ9Y6N3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 YBX1P10-201ENST00000444752 975 ntBASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLCA3PQ9Y6N3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 KRT16P5-201ENST00000455284 522 ntBASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLCA3PQ9Y6N3 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCA3PQ9Y6N3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms