Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 AL157384.1-201ENST00000445995 2473 ntBASIC20.92■□□□□ 0.94
SSX2IPQ9Y2D8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 TERF1P1-201ENST00000311003 1181 ntBASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 AC128688.1-201ENST00000487626 519 ntBASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSX2IPQ9Y2D8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 MESTP1-201ENST00000404287 994 ntBASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 AC004980.1-204ENST00000429707 299 ntBASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 EGLN1P1-201ENST00000531623 762 ntBASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSX2IPQ9Y2D8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.94
SSX2IPQ9Y2D8 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.89■□□□□ 0.94
SSX2IPQ9Y2D8 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SSX2IPQ9Y2D8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 LIN28AP1-201ENST00000429574 405 ntBASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SSX2IPQ9Y2D8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 TSPY14P-201ENST00000303979 915 ntBASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 AC097488.1-201ENST00000507834 756 ntBASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSX2IPQ9Y2D8 AC073508.3-201ENST00000619697 1419 ntBASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SSX2IPQ9Y2D8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms