Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF6Q9Y252 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 KRT17P3-201ENST00000420566 1262 ntBASIC18.29■□□□□ 0.52
RNF6Q9Y252 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF6Q9Y252 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF6Q9Y252 LETM1P2-201ENST00000597330 2178 ntBASIC18.28■□□□□ 0.52
RNF6Q9Y252 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 C1QBPP2-201ENST00000528754 825 ntBASIC18.28■□□□□ 0.52
RNF6Q9Y252 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 FAM197Y4-202ENST00000622692 608 ntBASIC18.28■□□□□ 0.52
RNF6Q9Y252 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF6Q9Y252 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF6Q9Y252 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF6Q9Y252 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RNF6Q9Y252 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF6Q9Y252 NEFHP1-201ENST00000412845 2629 ntBASIC18.27■□□□□ 0.52
RNF6Q9Y252 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.27■□□□□ 0.52
RNF6Q9Y252 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF6Q9Y252 KRT8P36-201ENST00000489121 1440 ntBASIC18.27■□□□□ 0.52
RNF6Q9Y252 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF6Q9Y252 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF6Q9Y252 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF6Q9Y252 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.27■□□□□ 0.52
RNF6Q9Y252 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF6Q9Y252 RPPH1-201ENST00000516869 333 ntBASIC18.27■□□□□ 0.52
RNF6Q9Y252 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF6Q9Y252 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.27■□□□□ 0.52
RNF6Q9Y252 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RNF6Q9Y252 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF6Q9Y252 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF6Q9Y252 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF6Q9Y252 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF6Q9Y252 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF6Q9Y252 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RNF6Q9Y252 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.27■□□□□ 0.51
RNF6Q9Y252 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RNF6Q9Y252 CYP21A1P-202ENST00000354927 1481 ntBASIC18.26■□□□□ 0.51
RNF6Q9Y252 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF6Q9Y252 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF6Q9Y252 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF6Q9Y252 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF6Q9Y252 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.26■□□□□ 0.51
RNF6Q9Y252 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF6Q9Y252 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RNF6Q9Y252 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF6Q9Y252 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF6Q9Y252 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RNF6Q9Y252 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.26■□□□□ 0.51
RNF6Q9Y252 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.26■□□□□ 0.51
RNF6Q9Y252 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RNF6Q9Y252 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.26■□□□□ 0.51
RNF6Q9Y252 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.26■□□□□ 0.51
RNF6Q9Y252 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms