Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2BQ9UQN3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 BX276092.2-201ENST00000417668 665 ntBASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 AC105036.2-201ENST00000569468 176 ntBASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 AC080038.1-201ENST00000611274 1154 ntBASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 AC092437.1-201ENST00000624794 1048 ntBASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 AC073111.5-205ENST00000641717 521 ntBASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHMP2BQ9UQN3 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 TFP1-202ENST00000475455 1573 ntBASIC19.77■□□□□ 0.76
CHMP2BQ9UQN3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP2BQ9UQN3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
CHMP2BQ9UQN3 AL161938.1-201ENST00000569833 2180 ntBASIC19.77■□□□□ 0.75
CHMP2BQ9UQN3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CHMP2BQ9UQN3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 AF201337.1-201ENST00000520239 748 ntBASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 IKBKGP1-201ENST00000612193 1073 ntBASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 AL049812.1-201ENST00000432563 2267 ntBASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CHMP2BQ9UQN3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.75■□□□□ 0.75
CHMP2BQ9UQN3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms