Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 TERF1P1-201ENST00000311003 1181 ntBASIC19.02■□□□□ 0.64
SATB2Q9UPW6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 AL137013.1-201ENST00000432946 1228 ntBASIC19.02■□□□□ 0.64
SATB2Q9UPW6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 FITM1-202ENST00000559294 800 ntBASIC19.02■□□□□ 0.64
SATB2Q9UPW6 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SATB2Q9UPW6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.02■□□□□ 0.63
SATB2Q9UPW6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SATB2Q9UPW6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 KRT16P1-201ENST00000399124 1418 ntBASIC19.01■□□□□ 0.63
SATB2Q9UPW6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 LINC01006-201ENST00000333319 2292 ntBASIC19.01■□□□□ 0.63
SATB2Q9UPW6 HLA-G-202ENST00000376815 851 ntBASIC19.01■□□□□ 0.63
SATB2Q9UPW6 HLA-G-203ENST00000376818 1127 ntBASIC19.01■□□□□ 0.63
SATB2Q9UPW6 NIFKP9-201ENST00000419265 221 ntBASIC19.01■□□□□ 0.63
SATB2Q9UPW6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 KSR1P1-201ENST00000446298 240 ntBASIC19.01■□□□□ 0.63
SATB2Q9UPW6 AC116562.2-201ENST00000507042 360 ntBASIC19.01■□□□□ 0.63
SATB2Q9UPW6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SATB2Q9UPW6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19■□□□□ 0.63
SATB2Q9UPW6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SATB2Q9UPW6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19■□□□□ 0.63
SATB2Q9UPW6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SATB2Q9UPW6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
SATB2Q9UPW6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19■□□□□ 0.63
SATB2Q9UPW6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19■□□□□ 0.63
SATB2Q9UPW6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19■□□□□ 0.63
SATB2Q9UPW6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19■□□□□ 0.63
SATB2Q9UPW6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19■□□□□ 0.63
SATB2Q9UPW6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19■□□□□ 0.63
SATB2Q9UPW6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SATB2Q9UPW6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19■□□□□ 0.63
SATB2Q9UPW6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19■□□□□ 0.63
SATB2Q9UPW6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19■□□□□ 0.63
SATB2Q9UPW6 AC010947.1-201ENST00000623454 693 ntBASIC19■□□□□ 0.63
SATB2Q9UPW6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19■□□□□ 0.63
SATB2Q9UPW6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SATB2Q9UPW6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19■□□□□ 0.63
SATB2Q9UPW6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SATB2Q9UPW6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SATB2Q9UPW6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19■□□□□ 0.63
SATB2Q9UPW6 AC020907.5-201ENST00000624372 1936 ntBASIC19■□□□□ 0.63
SATB2Q9UPW6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 SLC25A3P1-201ENST00000443844 931 ntBASIC18.99■□□□□ 0.63
SATB2Q9UPW6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SATB2Q9UPW6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms