Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 AC133041.1-202ENST00000642053 222 ntBASIC18.82■□□□□ 0.6
SNX6Q9UNH7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX6Q9UNH7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 AC120498.9-201ENST00000339021 3867 ntBASIC18.81■□□□□ 0.6
SNX6Q9UNH7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.81■□□□□ 0.6
SNX6Q9UNH7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX6Q9UNH7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.8■□□□□ 0.6
SNX6Q9UNH7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 AP006587.1-201ENST00000534129 1502 ntBASIC18.8■□□□□ 0.6
SNX6Q9UNH7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 AC083880.1-201ENST00000608266 535 ntBASIC18.8■□□□□ 0.6
SNX6Q9UNH7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX6Q9UNH7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 AC069152.1-201ENST00000438030 544 ntBASIC18.79■□□□□ 0.6
SNX6Q9UNH7 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.79■□□□□ 0.6
SNX6Q9UNH7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 AC098934.4-201ENST00000564127 592 ntBASIC18.79■□□□□ 0.6
SNX6Q9UNH7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 AP000974.1-201ENST00000623909 2387 ntBASIC18.79■□□□□ 0.6
SNX6Q9UNH7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX6Q9UNH7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX6Q9UNH7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX6Q9UNH7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SNX6Q9UNH7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.78■□□□□ 0.6
SNX6Q9UNH7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms