Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 AC120498.9-201ENST00000339021 3867 ntBASIC19.81■□□□□ 0.76
UBP1Q9NZI7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
UBP1Q9NZI7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 YBX1P10-201ENST00000444752 975 ntBASIC19.8■□□□□ 0.76
UBP1Q9NZI7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 AC006058.3-201ENST00000606217 1069 ntBASIC19.8■□□□□ 0.76
UBP1Q9NZI7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 AC087289.5-201ENST00000586076 3175 ntBASIC19.8■□□□□ 0.76
UBP1Q9NZI7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
UBP1Q9NZI7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 PRKY-204ENST00000533551 1019 ntBASIC19.79■□□□□ 0.76
UBP1Q9NZI7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 MTDHP1-201ENST00000605323 784 ntBASIC19.79■□□□□ 0.76
UBP1Q9NZI7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.79■□□□□ 0.76
UBP1Q9NZI7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 AL023875.1-201ENST00000640777 796 ntBASIC19.78■□□□□ 0.76
UBP1Q9NZI7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UBP1Q9NZI7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms