Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SPHK1Q9NYA1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 KRT16P1-201ENST00000399124 1418 ntBASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 LINC01465-201ENST00000408887 1940 ntBASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 AL445675.2-201ENST00000620291 557 ntBASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SPHK1Q9NYA1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SPHK1Q9NYA1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SPHK1Q9NYA1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SPHK1Q9NYA1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.77■□□□□ 0.59
SPHK1Q9NYA1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 AC026471.5-201ENST00000615068 467 ntBASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 TREX1-205ENST00000625293 1783 ntBASIC18.76■□□□□ 0.59
SPHK1Q9NYA1 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
SPHK1Q9NYA1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 AC004980.1-204ENST00000429707 299 ntBASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 TSPY15P-201ENST00000457163 923 ntBASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 MIR4785-201ENST00000585005 73 ntBASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.74■□□□□ 0.59
SPHK1Q9NYA1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms