Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 ESPNP-201ENST00000270691 2015 ntBASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CDC42SE1Q9NRR8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 AC011676.5-201ENST00000624864 2660 ntBASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 AC126763.1-201ENST00000552015 2118 ntBASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
CDC42SE1Q9NRR8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
CDC42SE1Q9NRR8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CDC42SE1Q9NRR8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
CDC42SE1Q9NRR8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms