Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 AC023632.3-201ENST00000521633 145 ntBASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 AC106820.2-201ENST00000563775 3264 ntBASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHB16Q9NRJ7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 CYP2T3P-201ENST00000601990 817 ntBASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHB16Q9NRJ7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 AC006015.1-201ENST00000429970 570 ntBASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 DUX4L16-201ENST00000555130 1264 ntBASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 AL137784.2-201ENST00000607332 1000 ntBASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 OR10C1-204ENST00000622521 1039 ntBASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHB16Q9NRJ7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 AC022517.1-201ENST00000592429 346 ntBASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 AC011767.1-201ENST00000617410 1153 ntBASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 AC005332.7-201ENST00000614046 2005 ntBASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHB16Q9NRJ7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms