Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 RCC2P6-201ENST00000526625 1557 ntBASIC20.13■□□□□ 0.81
HPS4Q9NQG7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 INGX-201ENST00000359239 846 ntBASIC20.13■□□□□ 0.81
HPS4Q9NQG7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 DUX4L26-201ENST00000489078 1255 ntBASIC20.13■□□□□ 0.81
HPS4Q9NQG7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 AL157384.1-201ENST00000445995 2473 ntBASIC20.13■□□□□ 0.81
HPS4Q9NQG7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
HPS4Q9NQG7 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 AP000692.2-201ENST00000608391 879 ntBASIC20.12■□□□□ 0.81
HPS4Q9NQG7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 LINC01521-201ENST00000504184 1943 ntBASIC20.12■□□□□ 0.81
HPS4Q9NQG7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
HPS4Q9NQG7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 AC011298.2-201ENST00000617989 482 ntBASIC20.11■□□□□ 0.81
HPS4Q9NQG7 AC006011.2-201ENST00000621313 1158 ntBASIC20.11■□□□□ 0.81
HPS4Q9NQG7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.11■□□□□ 0.81
HPS4Q9NQG7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 TMEM179-206ENST00000616017 1645 ntBASIC20.1■□□□□ 0.81
HPS4Q9NQG7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 SLC25A1P4-201ENST00000567977 778 ntBASIC20.1■□□□□ 0.81
HPS4Q9NQG7 FAM87A-204ENST00000613235 858 ntBASIC20.1■□□□□ 0.81
HPS4Q9NQG7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
HPS4Q9NQG7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 BX119927.1-201ENST00000636596 1552 ntBASIC20.09■□□□□ 0.81
HPS4Q9NQG7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
HPS4Q9NQG7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms