Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 AL358472.4-201ENST00000633140 710 ntBASIC20.11■□□□□ 0.81
BRD9Q9H8M2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 AC096733.2-201ENST00000609937 1394 ntBASIC20.1■□□□□ 0.81
BRD9Q9H8M2 AP005212.1-201ENST00000581547 1997 ntBASIC20.1■□□□□ 0.81
BRD9Q9H8M2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 RNF152P1-201ENST00000397754 604 ntBASIC20.1■□□□□ 0.81
BRD9Q9H8M2 SLC25A1P2-201ENST00000430693 912 ntBASIC20.1■□□□□ 0.81
BRD9Q9H8M2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.1■□□□□ 0.81
BRD9Q9H8M2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 AIRN-201ENST00000601203 4374 ntBASIC20.09■□□□□ 0.81
BRD9Q9H8M2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
BRD9Q9H8M2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 FAM8A6P-201ENST00000407496 1135 ntBASIC20.08■□□□□ 0.81
BRD9Q9H8M2 AC092647.4-201ENST00000457211 535 ntBASIC20.08■□□□□ 0.81
BRD9Q9H8M2 AC091390.4-202ENST00000476426 537 ntBASIC20.08■□□□□ 0.81
BRD9Q9H8M2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.08■□□□□ 0.81
BRD9Q9H8M2 AL138966.2-201ENST00000621997 464 ntBASIC20.08■□□□□ 0.81
BRD9Q9H8M2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.8
BRD9Q9H8M2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.08■□□□□ 0.8
BRD9Q9H8M2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.08■□□□□ 0.8
BRD9Q9H8M2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
BRD9Q9H8M2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.08■□□□□ 0.8
BRD9Q9H8M2 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
BRD9Q9H8M2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
BRD9Q9H8M2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.07■□□□□ 0.8
BRD9Q9H8M2 YBX1P2-201ENST00000489612 999 ntBASIC20.07■□□□□ 0.8
BRD9Q9H8M2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.07■□□□□ 0.8
BRD9Q9H8M2 AC010653.2-201ENST00000623505 997 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms