Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.06■□□□□ 0.96
NXF3Q9H4D5 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.06■□□□□ 0.96
NXF3Q9H4D5 AL160286.2-201ENST00000567150 934 ntBASIC21.06■□□□□ 0.96
NXF3Q9H4D5 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NXF3Q9H4D5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.06■□□□□ 0.96
NXF3Q9H4D5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NXF3Q9H4D5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NXF3Q9H4D5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NXF3Q9H4D5 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.06■□□□□ 0.96
NXF3Q9H4D5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NXF3Q9H4D5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.06■□□□□ 0.96
NXF3Q9H4D5 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 RN7SL850P-201ENST00000579959 291 ntBASIC21.05■□□□□ 0.96
NXF3Q9H4D5 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NXF3Q9H4D5 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 LINC01521-201ENST00000504184 1943 ntBASIC21.04■□□□□ 0.96
NXF3Q9H4D5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 FAM207BP-201ENST00000447172 505 ntBASIC21.04■□□□□ 0.96
NXF3Q9H4D5 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.04■□□□□ 0.96
NXF3Q9H4D5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 MIR1224-201ENST00000408193 85 ntBASIC21.03■□□□□ 0.96
NXF3Q9H4D5 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 AC005363.2-201ENST00000618631 242 ntBASIC21.03■□□□□ 0.96
NXF3Q9H4D5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NXF3Q9H4D5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 MFAP1P1-201ENST00000442257 1255 ntBASIC21.02■□□□□ 0.96
NXF3Q9H4D5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.02■□□□□ 0.96
NXF3Q9H4D5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.02■□□□□ 0.95
NXF3Q9H4D5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NXF3Q9H4D5 KRT18P22-201ENST00000402024 1347 ntBASIC21.02■□□□□ 0.95
NXF3Q9H4D5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NXF3Q9H4D5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms