Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN3Q9H347 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.03■□□□□ 0.48
UBQLN3Q9H347 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 KRASP1-201ENST00000407852 552 ntBASIC18.03■□□□□ 0.48
UBQLN3Q9H347 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 AC008550.1-201ENST00000511500 884 ntBASIC18.03■□□□□ 0.48
UBQLN3Q9H347 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 KRT16P6-202ENST00000425692 1426 ntBASIC18.03■□□□□ 0.48
UBQLN3Q9H347 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN3Q9H347 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.02■□□□□ 0.48
UBQLN3Q9H347 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.02■□□□□ 0.47
UBQLN3Q9H347 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
UBQLN3Q9H347 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 AC009237.14-201ENST00000609975 1594 ntBASIC18.01■□□□□ 0.47
UBQLN3Q9H347 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
UBQLN3Q9H347 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18■□□□□ 0.47
UBQLN3Q9H347 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
UBQLN3Q9H347 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18■□□□□ 0.47
UBQLN3Q9H347 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 RPS2P4-201ENST00000476944 856 ntBASIC18■□□□□ 0.47
UBQLN3Q9H347 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
UBQLN3Q9H347 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18■□□□□ 0.47
UBQLN3Q9H347 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18■□□□□ 0.47
UBQLN3Q9H347 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18■□□□□ 0.47
UBQLN3Q9H347 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18■□□□□ 0.47
UBQLN3Q9H347 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18■□□□□ 0.47
UBQLN3Q9H347 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18■□□□□ 0.47
UBQLN3Q9H347 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18■□□□□ 0.47
UBQLN3Q9H347 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.99■□□□□ 0.47
UBQLN3Q9H347 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms