Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
VPS11Q9H270 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS11Q9H270 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS11Q9H270 HCG11-201ENST00000411553 5696 ntBASIC19.56■□□□□ 0.72
VPS11Q9H270 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
VPS11Q9H270 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
VPS11Q9H270 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.56■□□□□ 0.72
VPS11Q9H270 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS11Q9H270 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 AC023632.3-201ENST00000521633 145 ntBASIC19.56■□□□□ 0.72
VPS11Q9H270 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.56■□□□□ 0.72
VPS11Q9H270 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
VPS11Q9H270 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
VPS11Q9H270 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
VPS11Q9H270 KRT17P1-201ENST00000399211 1546 ntBASIC19.56■□□□□ 0.72
VPS11Q9H270 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
VPS11Q9H270 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.55■□□□□ 0.72
VPS11Q9H270 AC026471.1-201ENST00000564629 3026 ntBASIC19.55■□□□□ 0.72
VPS11Q9H270 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS11Q9H270 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
VPS11Q9H270 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS11Q9H270 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
VPS11Q9H270 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS11Q9H270 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.55■□□□□ 0.72
VPS11Q9H270 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
VPS11Q9H270 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.55■□□□□ 0.72
VPS11Q9H270 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS11Q9H270 OR10C1-204ENST00000622521 1039 ntBASIC19.55■□□□□ 0.72
VPS11Q9H270 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.55■□□□□ 0.72
VPS11Q9H270 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS11Q9H270 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
VPS11Q9H270 AC005082.1-201ENST00000413042 2259 ntBASIC19.55■□□□□ 0.72
VPS11Q9H270 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS11Q9H270 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS11Q9H270 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VPS11Q9H270 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
VPS11Q9H270 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
VPS11Q9H270 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
VPS11Q9H270 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
VPS11Q9H270 LETM1P2-201ENST00000597330 2178 ntBASIC19.54■□□□□ 0.72
VPS11Q9H270 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.54■□□□□ 0.72
VPS11Q9H270 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS11Q9H270 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS11Q9H270 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
VPS11Q9H270 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.54■□□□□ 0.72
VPS11Q9H270 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
VPS11Q9H270 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
VPS11Q9H270 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.53■□□□□ 0.72
VPS11Q9H270 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 AC093787.1-201ENST00000450396 207 ntBASIC19.53■□□□□ 0.72
VPS11Q9H270 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
VPS11Q9H270 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.53■□□□□ 0.72
VPS11Q9H270 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.53■□□□□ 0.72
VPS11Q9H270 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
VPS11Q9H270 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
VPS11Q9H270 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
VPS11Q9H270 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
VPS11Q9H270 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS11Q9H270 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
VPS11Q9H270 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS11Q9H270 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS11Q9H270 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
VPS11Q9H270 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
VPS11Q9H270 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms