Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 FSCN1P1-201ENST00000568912 1481 ntBASIC21.13■□□□□ 0.97
CDT1Q9H211 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDT1Q9H211 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDT1Q9H211 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDT1Q9H211 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.12■□□□□ 0.97
CDT1Q9H211 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 RCC2P6-201ENST00000526625 1557 ntBASIC21.12■□□□□ 0.97
CDT1Q9H211 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.12■□□□□ 0.97
CDT1Q9H211 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDT1Q9H211 AL160286.2-201ENST00000567150 934 ntBASIC21.12■□□□□ 0.97
CDT1Q9H211 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.12■□□□□ 0.97
CDT1Q9H211 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.12■□□□□ 0.97
CDT1Q9H211 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDT1Q9H211 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDT1Q9H211 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 UNC93B2-201ENST00000285383 730 ntBASIC21.11■□□□□ 0.97
CDT1Q9H211 AC008040.2-201ENST00000461049 708 ntBASIC21.11■□□□□ 0.97
CDT1Q9H211 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
CDT1Q9H211 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.11■□□□□ 0.97
CDT1Q9H211 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.11■□□□□ 0.97
CDT1Q9H211 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.11■□□□□ 0.97
CDT1Q9H211 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.11■□□□□ 0.97
CDT1Q9H211 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.11■□□□□ 0.97
CDT1Q9H211 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.11■□□□□ 0.97
CDT1Q9H211 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.11■□□□□ 0.97
CDT1Q9H211 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDT1Q9H211 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDT1Q9H211 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.1■□□□□ 0.97
CDT1Q9H211 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.1■□□□□ 0.97
CDT1Q9H211 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 AC087499.1-201ENST00000418141 1075 ntBASIC21.1■□□□□ 0.97
CDT1Q9H211 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.1■□□□□ 0.97
CDT1Q9H211 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CDT1Q9H211 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.1■□□□□ 0.97
CDT1Q9H211 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.1■□□□□ 0.97
CDT1Q9H211 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.1■□□□□ 0.97
CDT1Q9H211 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDT1Q9H211 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CDT1Q9H211 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.09■□□□□ 0.97
CDT1Q9H211 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.09■□□□□ 0.97
CDT1Q9H211 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.09■□□□□ 0.97
CDT1Q9H211 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDT1Q9H211 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.09■□□□□ 0.97
CDT1Q9H211 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.09■□□□□ 0.97
CDT1Q9H211 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDT1Q9H211 AC073130.3-201ENST00000624389 2278 ntBASIC21.08■□□□□ 0.97
CDT1Q9H211 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.08■□□□□ 0.97
CDT1Q9H211 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDT1Q9H211 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDT1Q9H211 AC004951.3-201ENST00000418645 1148 ntBASIC21.08■□□□□ 0.97
CDT1Q9H211 AL390955.1-201ENST00000428694 934 ntBASIC21.08■□□□□ 0.97
CDT1Q9H211 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.08■□□□□ 0.97
CDT1Q9H211 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.08■□□□□ 0.97
CDT1Q9H211 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CDT1Q9H211 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.08■□□□□ 0.97
CDT1Q9H211 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.08■□□□□ 0.97
CDT1Q9H211 AC011298.2-201ENST00000617989 482 ntBASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms