Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 TCTE3-201ENST00000366774 769 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 BMS1P3-201ENST00000372011 932 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AP002530.1-201ENST00000405705 684 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AL445213.1-201ENST00000412589 747 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC01881-201ENST00000416103 412 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AL158827.1-201ENST00000416300 391 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC016772.1-201ENST00000444170 1261 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 RPL12P26-201ENST00000452430 487 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC245187.1-201ENST00000520162 559 ntTSL 4 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 LDHC-208ENST00000544105 875 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 LDHC-210ENST00000546146 701 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC132938.2-201ENST00000579188 680 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AP000894.2-203ENST00000580612 439 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC011472.3-201ENST00000586051 906 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AL137072.1-201ENST00000603444 466 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC002487.1-201ENST00000604565 994 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AL133243.1-201ENST00000614487 366 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC112204.3-201ENST00000623822 332 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC073911.3-201ENST00000624401 631 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 TEX41-271ENST00000628213 993 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 FO082842.1-201ENST00000423552 1370 ntBASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP3-3Q9BYR6 AC010501.1-201ENST00000606270 1962 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 SUMO2-201ENST00000314523 809 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 FAM133CP-201ENST00000332869 704 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 KRTAP4-11-201ENST00000391413 1180 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 RPL17P11-201ENST00000417593 544 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AC141930.2-201ENST00000419028 555 ntTSL 4 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 HMGB1P32-201ENST00000425971 565 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AC046176.1-201ENST00000435260 1170 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AL049648.1-201ENST00000443692 282 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 OR52J1P-201ENST00000450596 932 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC01504-203ENST00000451596 671 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AC234781.3-201ENST00000452540 973 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 SYPL1P1-201ENST00000473622 768 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AC104115.1-201ENST00000484005 623 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 OR5H5P-201ENST00000503164 928 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 FAM173B-205ENST00000510047 1160 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AC006499.1-201ENST00000511870 850 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 HNRNPA1P12-201ENST00000515379 961 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 CCND2-AS1-201ENST00000539135 555 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 AC015802.4-201ENST00000589963 578 ntTSL 3 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 VN1R90P-201ENST00000595717 726 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 RBBP4P3-201ENST00000619705 1283 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 LINC01515-201ENST00000433152 1339 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 ANXA3-209ENST00000512884 1335 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 ZNF680P1-201ENST00000436625 1469 ntBASIC12.01□□□□□ -0.49
KRTAP3-3Q9BYR6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms