Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 GCSHP2-201ENST00000560971 527 ntBASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 MIR4674-201ENST00000582457 87 ntBASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC10.13□□□□□ -0.79
KRTAP4-1Q9BYQ7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 SPDYE15P-201ENST00000424157 909 ntBASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 AL136038.3-201ENST00000561909 1096 ntBASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP4-1Q9BYQ7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 KRT8P11-201ENST00000409686 1436 ntBASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 AC246785.2-201ENST00000432512 513 ntBASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 CA15P1-201ENST00000481698 905 ntBASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 VENTXP5-201ENST00000523979 775 ntBASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP4-1Q9BYQ7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms