Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 KRT16P6-202ENST00000425692 1426 ntBASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 AC133681.1-201ENST00000465482 601 ntBASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCGF1Q9BSM1 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCGF1Q9BSM1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 NBPF21P-201ENST00000425093 1451 ntBASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCGF1Q9BSM1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 AL596275.1-201ENST00000423464 877 ntBASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 Z99916.2-201ENST00000604037 246 ntBASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCGF1Q9BSM1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms