Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXB1Q99853 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXB1Q99853 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXB1Q99853 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.14■□□□□ 0.33
FOXB1Q99853 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
FOXB1Q99853 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXB1Q99853 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXB1Q99853 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
FOXB1Q99853 KRT16P5-201ENST00000455284 522 ntBASIC17.14■□□□□ 0.33
FOXB1Q99853 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
FOXB1Q99853 FAM197Y4-202ENST00000622692 608 ntBASIC17.14■□□□□ 0.33
FOXB1Q99853 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.14■□□□□ 0.33
FOXB1Q99853 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
FOXB1Q99853 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.14■□□□□ 0.33
FOXB1Q99853 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXB1Q99853 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXB1Q99853 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
FOXB1Q99853 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
FOXB1Q99853 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
FOXB1Q99853 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.14■□□□□ 0.33
FOXB1Q99853 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.14■□□□□ 0.33
FOXB1Q99853 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXB1Q99853 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
FOXB1Q99853 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXB1Q99853 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXB1Q99853 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXB1Q99853 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
FOXB1Q99853 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FOXB1Q99853 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
FOXB1Q99853 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXB1Q99853 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
FOXB1Q99853 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXB1Q99853 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.13■□□□□ 0.33
FOXB1Q99853 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
FOXB1Q99853 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.13■□□□□ 0.33
FOXB1Q99853 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.13■□□□□ 0.33
FOXB1Q99853 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.13■□□□□ 0.33
FOXB1Q99853 AL359736.2-201ENST00000621992 437 ntBASIC17.13■□□□□ 0.33
FOXB1Q99853 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXB1Q99853 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXB1Q99853 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.13■□□□□ 0.33
FOXB1Q99853 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
FOXB1Q99853 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXB1Q99853 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXB1Q99853 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.13■□□□□ 0.33
FOXB1Q99853 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
FOXB1Q99853 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
FOXB1Q99853 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
FOXB1Q99853 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
FOXB1Q99853 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.12■□□□□ 0.33
FOXB1Q99853 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXB1Q99853 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXB1Q99853 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXB1Q99853 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.12■□□□□ 0.33
FOXB1Q99853 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FOXB1Q99853 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXB1Q99853 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXB1Q99853 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FOXB1Q99853 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXB1Q99853 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXB1Q99853 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXB1Q99853 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXB1Q99853 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXB1Q99853 AC142381.4-202ENST00000563973 229 ntBASIC17.11■□□□□ 0.33
FOXB1Q99853 C1QL1P1-201ENST00000568105 661 ntBASIC17.11■□□□□ 0.33
FOXB1Q99853 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXB1Q99853 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FOXB1Q99853 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FOXB1Q99853 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXB1Q99853 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXB1Q99853 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXB1Q99853 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.11■□□□□ 0.33
FOXB1Q99853 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXB1Q99853 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FOXB1Q99853 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FOXB1Q99853 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
FOXB1Q99853 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FOXB1Q99853 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FOXB1Q99853 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms