Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAS2Q99743 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
NPAS2Q99743 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPAS2Q99743 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 AL356652.1-201ENST00000615962 565 ntBASIC19.01■□□□□ 0.63
NPAS2Q99743 LINC01465-201ENST00000408887 1940 ntBASIC19.01■□□□□ 0.63
NPAS2Q99743 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.01■□□□□ 0.63
NPAS2Q99743 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS2Q99743 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.01■□□□□ 0.63
NPAS2Q99743 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPAS2Q99743 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19■□□□□ 0.63
NPAS2Q99743 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19■□□□□ 0.63
NPAS2Q99743 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
NPAS2Q99743 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NPAS2Q99743 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 SERPINH1P1-201ENST00000419794 1249 ntBASIC19■□□□□ 0.63
NPAS2Q99743 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19■□□□□ 0.63
NPAS2Q99743 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
NPAS2Q99743 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19■□□□□ 0.63
NPAS2Q99743 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19■□□□□ 0.63
NPAS2Q99743 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19■□□□□ 0.63
NPAS2Q99743 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19■□□□□ 0.63
NPAS2Q99743 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19■□□□□ 0.63
NPAS2Q99743 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19■□□□□ 0.63
NPAS2Q99743 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
NPAS2Q99743 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19■□□□□ 0.63
NPAS2Q99743 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
NPAS2Q99743 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPAS2Q99743 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19■□□□□ 0.63
NPAS2Q99743 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS2Q99743 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
NPAS2Q99743 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.99■□□□□ 0.63
NPAS2Q99743 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 KRT18P68-201ENST00000392293 1000 ntBASIC18.99■□□□□ 0.63
NPAS2Q99743 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.99■□□□□ 0.63
NPAS2Q99743 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.99■□□□□ 0.63
NPAS2Q99743 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.99■□□□□ 0.63
NPAS2Q99743 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.99■□□□□ 0.63
NPAS2Q99743 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
NPAS2Q99743 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NPAS2Q99743 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NPAS2Q99743 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NPAS2Q99743 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
NPAS2Q99743 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
NPAS2Q99743 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.98■□□□□ 0.63
NPAS2Q99743 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
NPAS2Q99743 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.98■□□□□ 0.63
NPAS2Q99743 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
NPAS2Q99743 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
NPAS2Q99743 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
NPAS2Q99743 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
NPAS2Q99743 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
NPAS2Q99743 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms